Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211475g00014 ATGTCAAGTTTCCCTGATGCGGTGGCTGATGGCCGGAGGTACGGCAAGGCGCCGGAGAAGTCTAATTTTTCTCAGACTTGCAGCCTCTTGAGTCAGTTCTTGAAGGAGAAGCGTTCTTCTGGAGCTTCTACTCTCGGAGTTGGGCCAAAAATGGAGCCCAGAGCAAGTACGAAGGATTTTCTAGGAAGTATTCAAAATTCAGATGGGGGTTTGAGACTAAATGCTTCTGCTCTGGATTCCCTTCCTCAGCATGTGGAAAATCCCTGCATCAAGAAGTCTAATATTAGGTCATTGGGGTCTGAATCTCCGCAGTTGACCATATTCTATGCCGGAAAAATGTTGGTATTTGATGCCTTCCCACCAGACAAGGCCACAGAGGTAATGGAGTTAGCCACCAAGTTAGCCTCGAACAGTTCCATTGTCGAACAAAGCCAACCCAGTGCTTCCGTTGCAGCTGAAAATTTGAATAAGGACAAAGTGCTGCAGACAAATAATACCTCTGAAACTCCTAGACCAGGAAACCAAGCTGTTGGTTCAGATATGAGGTATCCAAGGAGAGCTTCACTTCTAAAGTTCCTTGAGAAGAGAAAAGAAAGGGTCATCGCTAGAGGACCTTACCAAGTAAACAACCTGAATCCGAAGCCCGAGGGCAGCAGCAGTTCCGGAGTCGAACCGGGCCCGATAAACAGCCCGAATTTGAAGCATGAAGAAAGCAGTTCAGGGGTTGTACCTGAAGATCAGTCCTCGAAACACTTTGACCTTAACTCGTAG 771 0.4721 MSSFPDAVADGRRYGKAPEKSNFSQTCSLLSQFLKEKRSSGASTLGVGPKMEPRASTKDFLGSIQNSDGGLRLNASALDSLPQHVENPCIKKSNIRSLGSESPQLTIFYAGKMLVFDAFPPDKATEVMELATKLASNSSIVEQSQPSASVAAENLNKDKVLQTNNTSETPRPGNQAVGSDMRYPRRASLLKFLEKRKERVIARGPYQVNNLNPKPEGSSSSGVEPGPINSPNLKHEESSSGVVPEDQSSKHFDLNS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211475g00014 256 MobiDBLite consensus disorder prediction 136 155 - -
Stsc211475g00014 256 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 218 IPR040390 -
Stsc211475g00014 256 MobiDBLite consensus disorder prediction 211 256 - -
Stsc211475g00014 256 MobiDBLite consensus disorder prediction 160 174 - -
Stsc211475g00014 256 ProSiteProfiles Tify domain profile. 98 133 IPR010399 -
Stsc211475g00014 256 Pfam Jas motif 185 207 IPR018467 -
Stsc211475g00014 256 SMART tify_2 98 133 IPR010399 -
Stsc211475g00014 256 MobiDBLite consensus disorder prediction 202 256 - -
Stsc211475g00014 256 MobiDBLite consensus disorder prediction 1 23 - -
Stsc211475g00014 256 MobiDBLite consensus disorder prediction 160 182 - -
Stsc211475g00014 256 Pfam tify domain 101 131 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211475g00014 Stsc-Chr211475 86377 89262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211475g00014 8 208 Tify Gene Family AT1G19180 33.040 8.50e-21 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc211475g00014 tify 1.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211475g00014 K13464 - gmx:100778559 329.331