Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211475g00009 ATGGAGCCGCCGGAAATGTTACCGTTTGAGACGGCCGAGAAGATCATCCTCCGCTGGGACTCCACCGCCTCTGAGGAAGCAAGGGAGAAGATGATCTTCGACGGTGACCGCCACGAGGCGGATCGTTACCTCCAGGCCGTCGATGAAATCCAACGCTCCATGTCTTCTGCTTCCATCTCCGATGACCCCAAAGTCAACTCCGCGCTCCAGATCGCCATGGCTCGACTCGAGGACGAGTTCCGAAACATCCTCATCTCCCACACCAACCCAATCGAAGCTGATTCACTCGTAGATCCCACTTCCCTCCATTTCACCACCCCCGAAGACGAAGAAGAACATGACCAACACGACCAACAACAACAAGAACCACCTCCTGATTCTTCTTCCTCTTCCTCCTCCTTTTCCTCAGCTTCAAAGCAACGCCATCACAACGACGGAGACGGCAGCAGCGACGCCGACGCCTGCGTGAATCTCCTCCGCTTCAACAGCGGCGACGCTGCTTCCAGCGTGCACAGCAGCTACCGCTCCACTAGCAGCATCCGGGAGATCGATCTGATTCCCGGCGAAGCAGTCTACGACCTCCGCAGCATCGCGGAGAGGATGATCTCCTCCGGCTACCTCCGCGAGTGCATTCAGGTGTACGGAAGCGTGAGGAAGTCCGCCGTGGACGCCAGTTTCCGGAGGCTTGGGATCGAGAAGCTGAGCATAGGCGACGTTCAGCGGCTGGAGTGGGAGCAGCTCGAGNNNNNNNNNNTCTGTGTCCGGACTCTCTTCGCCAGCGAGAAGAAGCTTTGCGAGCAAATCTTCGATGGCGTCGGCACCGCCATCGACGATGCTTGCTTCATGGAGACAGTCAAGGGCCCCGCCATTCAGCTCTTCAACTTCGCTGAAGCCATTAGCATAAGCCGGAGATCCCCTGAGAAGCTCTTCAAGATTCTTGACCTTCATGATGCGTTAATGGACCTTATACCTGACATTGATGTCGTTTTCGATTCCAAGTCCTCCGAGTCAATTCGGATTCAGGCCGCAGAGATACTCTCCCGGTTGGCGGAGGCCGCCAGAGGAATCCTCTCCGAGTTCGAGAATGCCGTGCTTCGAGAACCTTCCAGGGTACCTGTCCCTGGTGGCACTATTCACCCCTTGACGAGGTATGTGATGAACTATATCAGCTTGATCTCTGATTACAAGCAGACTTTGAACGAGCTTATTGTGTCGAAGCCGTCGACAGGGTCTCGGTATTCCGGTGATCCTTCTACTCCGGACATGGATTTTACTGAGCTGGAGGGGAAGACCCCTTTGGCTATTCACTTGATATGGATCATTGTGATATTGCAGTTCAACTTAGATGGGAAGTCGAAGCATTATAAGGATGCTTCTCTCTCTCACCTCTTCATAATGAACAATGTCCACTACATTGTTCAGAAGGTGAGGGGTTCCCCTGAGTTAAGGCAAATGATTGGCGACGAGTATTTGAAGCGCCTCACCGGTAAGTTCCGGCAGGCTGCTACCAGCTATCAGAGGGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAGGGGCTCCATGTGAGTGGTGGCTTCTCTTCCGGGGTCTCGAGGAGTGCTTTGAGGGAAAGGTTTAAGTCCTTCAATGCCATGTTTGAGGAGGTTCATAGGACTCAAGCGGTTTGGTTGATACCGGATTCTCAGCTCAGGGAGGAGCTGAGAATTTCTATATCGGAGAAGCTGATCCCGGCATATCGCTCGTTTCTTGGGCGGTTCAGGAGCCAGATAGAGAGTGGACGGCATCCAGAGAACTACATTAAATACTCTGTTGAGGACTTGGAAGATGCTGTTTTGGATTTTTTCGAAGGAACACCTGTTTCACAGCACCTGAGGAGGAGATCTCAATGA 1896 0.529 MEPPEMLPFETAEKIILRWDSTASEEAREKMIFDGDRHEADRYLQAVDEIQRSMSSASISDDPKVNSALQIAMARLEDEFRNILISHTNPIEADSLVDPTSLHFTTPEDEEEHDQHDQQQQEPPPDSSSSSSSFSSASKQRHHNDGDGSSDADACVNLLRFNSGDAASSVHSSYRSTSSIREIDLIPGEAVYDLRSIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGIEKLSIGDVQRLEWEQLEXXXXCVRTLFASEKKLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDVVFDSKSSESIRIQAAEILSRLAEAARGILSEFENAVLREPSRVPVPGGTIHPLTRYVMNYISLISDYKQTLNELIVSKPSTGSRYSGDPSTPDMDFTELEGKTPLAIHLIWIIVILQFNLDGKSKHYKDASLSHLFIMNNVHYIVQKVRGSPELRQMIGDEYLKRLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSRSALRERFKSFNAMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSQIESGRHPENYIKYSVEDLEDAVLDFFEGTPVSQHLRRRSQ 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211475g00009 631 Pfam Exo70 exocyst complex subunit 252 613 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc211475g00009 631 MobiDBLite consensus disorder prediction 121 139 - -
Stsc211475g00009 631 MobiDBLite consensus disorder prediction 104 120 - -
Stsc211475g00009 631 Gene3D Exocyst complex component Exo70 128 627 - -
Stsc211475g00009 631 Gene3D Exocyst complex component Exo70 15 117 - -
Stsc211475g00009 631 SUPERFAMILY Cullin repeat-like 37 618 IPR016159 -
Stsc211475g00009 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 619 IPR004140 GO:0000145|GO:0006887
Stsc211475g00009 631 MobiDBLite consensus disorder prediction 94 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211475g00009 Stsc-Chr211475 69710 73661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211475g00009 9 631 EXO70 exocyst subunit family AT1G72470 68.504 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211475g00009 K07195 - qsa:O6P43_018425 959.518