Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211474g00019 ATGGCGGACCCAAAGATTTCGGCGTACTACCAAACACGCATGGCCCACTTCGGTGCCGTCACCAACGACTGGCTCGCCCAGGCCCAGTCCGCCTCCGCCATCACCACCACCACCCCACCACCACCATCTTCACCACCAACCGCCGCAACTCTCTCCGATCCCACCTACCAGAAACCCTCGTTCTCGGTAATCGACGAATTCAACCGGTGGCGGAAACAGCCTGACCTGGCGGAGGCCGTCGCCGCAATCCGCGCCCTCGCCGCTGTCATAAGATCGAGCATGGCCACCACAATGATGCAGCTGGAGATCGAGCTCAAATCCGCCTCTGATTCGCTCAAGTCATGGGATACAACCTCTATATCATTGACAGCAGCATGTGATCTGTTTATGCGGTATGTAACTAGGACTGCTGCTTTAGAATACGAAGACTTCAATTCGGCTAAGTCTCGCTTGATTGAACGTGCTGATAAGTTTGGAGAAATCTCATACACGGCTCGCAAAGTCATTGCAATGCTGAGTCAAGATTTCATATTCAATGGTTGTACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTGGAAGTTCTGAAATTGGCAGCGCAAAATAAAAAATTGTTTCGGGTTTTATGCACAGAGGGGAGACCAGACCGAACAGGGTTACGGTTGTCCAATGAATTGGTCAAGCTGGATATTCCTGTGAAACTTGTAATAGACTCTGCAGTGGCATATACTATGGATGAGGTGGACATGGTATTTGTGGGGGCAGATGGAGTTGTCGAAAGTGGTGGTATAATCAACATGATGGGCACATACCAAATTGCGATGGTCGCAAAGAGCATGAGCAAGCCAGTTTATGTGGCAGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCGTTGGATCAAAAGGATTTGGCACCTGCATTGCGCCCAGTTGACTTCGGTGTACCAATTCCATCAAAGGTAGAGGTTGAATGTTCTGCAAGGGATTACACTCCTCCTCAATATCTGACTCTGCTTTTCACTGATTTAGGTGTTCTTACTCCATCTGTTGTTAGTGATGAGCTTATCCAGCTATACTTATAG 1083 0.4848 MADPKISAYYQTRMAHFGAVTNDWLAQAQSASAITTTTPPPPSSPPTAATLSDPTYQKPSFSVIDEFNRWRKQPDLAEAVAAIRALAAVIRSSMATTMMQLEIELKSASDSLKSWDTTSISLTAACDLFMRYVTRTAALEYEDFNSAKSRLIERADKFGEISYTARKVIAMLSQDFIFNGCTILVHGFSRVVLEVLKLAAQNKKLFRVLCTEGRPDRTGLRLSNELVKLDIPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIAMVAKSMSKPVYVAAESYKFARLYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211474g00019 360 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 18 360 - -
Stsc211474g00019 360 Gene3D - 60 161 IPR042528 -
Stsc211474g00019 360 SUPERFAMILY NagB/RpiA/CoA transferase-like 76 359 IPR037171 -
Stsc211474g00019 360 Gene3D - 163 360 IPR042529 -
Stsc211474g00019 360 Pfam Initiation factor 2 subunit family 74 348 IPR000649 GO:0044237
Stsc211474g00019 360 MobiDBLite consensus disorder prediction 31 55 - -
Stsc211474g00019 360 FunFam Translation initiation factor eIF-2B subunit alpha 59 161 - -
Stsc211474g00019 360 FunFam Translation initiation factor eIF-2B subunit alpha 164 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211474g00019 Stsc-Chr211474 154962 157794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211474g00019 6 360 Eukaryotic Initiation Factors Gene Family AT1G53880 79.437 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211474g00019 K03239 - qsa:O6P43_027485 562.377