Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211474g00008 ATGTGTGGTGGTGCTATTATCTCCGACTTCATTCCCGGCGGTTCCGCCGCGGTGGCGGCGAGGTCAAGGCGGGTTACGGCGGAAATCCTCTGGCCAAACCTGAGGAAGACAGTGAGGAAGTCTGGCAAGAAGAGGGGCGGTGCCGGCGGCCGTGTGATGGCGGTTGATGATGACTTTGAGGCTGATTTCAGGGAGTTTAAGGATGAGTCTGACATCGACGAGGACGAGGATTTCGATGTTGATGATGATTTTCTGGGTTCTGGTGTCAAGGGTTTTGGATCATTCGGTTCAGCCAACACCGCTAAGACTCACCTCAAACCTAATGGGCCTACTGCCGCGAAATCCGTCGAGACAAGTGGACAGGTTGAGAAGTCTGCCAAGAGAAAGAGGAAGAACCAGTATCGAGGAATCCGTCAGCGTCCATGGGGGAAATGGGCTGCTGAGATCCGTGACCCAAGAAAGGGTGTTCGTGTCTGGCTTGGGACATTCAACACTGCTGAAGAAGCCGCAAGGGCTTATGATGCTGAAGCAAGGAGGATCCGTGGCAACAAAGCCAAGGTGAACTTCCCTGATGAGGTTCTGGCTGCACCCGCGAAGCGCTTCAAGCCACGTTCTGAAATGCAGCTTCCCAAGGAAAAAATCAACTCTGCTAAGCCCAAACCGAGCAACCAAATGTTCAACTTCGGTAATGATCTCGGGGACTTCTACTCTCATTTTGATCAGGTGGAACAGAAGCCGCTGGTTAGCCAATATGCTAACATGGAGTCCTTCCCCGGGAACGGACTTTTGAATGCATCTGATGATGTGGCTGCTTATTTCACTTCGGAGCACTCGAGCAATTCGTTCGAGTATTCTGACCTTTCATGGGGCGAGCAGGGCCCAAAGACACCCGAAATATCATCCATGGTGCAGGGTGCTGCTAATCAGGCAAAGAACATGCAGCAGCCTAACAACACTCAGGATGACTCTCCAAAGTCGCTATCTGATGAGCTCGCAGATATCGAATCACAGCTGAAGTTCTTCGACACTCCTTATCTCGATGCGAGCTGGAACGATACATCCTTGGAATCCTTTCTTGGTGTGGAAACAACACAGGATGTCGGAAACCCGATGAACCTTTGGAGCTTCGACGACCTGCCTTCCGTTGGAGGCGGAGTCTTCTAA 1164 0.518 MCGGAIISDFIPGGSAAVAARSRRVTAEILWPNLRKTVRKSGKKRGGAGGRVMAVDDDFEADFREFKDESDIDEDEDFDVDDDFLGSGVKGFGSFGSANTAKTHLKPNGPTAAKSVETSGQVEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGNKAKVNFPDEVLAAPAKRFKPRSEMQLPKEKINSAKPKPSNQMFNFGNDLGDFYSHFDQVEQKPLVSQYANMESFPGNGLLNASDDVAAYFTSEHSSNSFEYSDLSWGEQGPKTPEISSMVQGAANQAKNMQQPNNTQDDSPKSLSDELADIESQLKFFDTPYLDASWNDTSLESFLGVETTQDVGNPMNLWSFDDLPSVGGGVF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211474g00008 387 FunFam Ethylene-responsive transcription factor 2 132 191 - -
Stsc211474g00008 387 Pfam AP2 domain 133 182 IPR001471 GO:0003700|GO:0006355
Stsc211474g00008 387 MobiDBLite consensus disorder prediction 98 137 - -
Stsc211474g00008 387 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Stsc211474g00008 387 MobiDBLite consensus disorder prediction 98 120 - -
Stsc211474g00008 387 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Stsc211474g00008 387 PANTHER DNA-BINDING DOMAIN 113 307 IPR044808 GO:0003700|GO:0009873
Stsc211474g00008 387 CDD AP2 133 191 IPR001471 GO:0003700|GO:0006355
Stsc211474g00008 387 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Stsc211474g00008 387 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Stsc211474g00008 387 MobiDBLite consensus disorder prediction 306 328 - -
Stsc211474g00008 387 Gene3D AP2/ERF domain 132 191 IPR036955 GO:0003700|GO:0006355
Stsc211474g00008 387 MobiDBLite consensus disorder prediction 306 325 - -
Stsc211474g00008 387 SUPERFAMILY DNA-binding domain 133 192 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211474g00008 Stsc-Chr211474 46739 49980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211474g00008 1 387 AP2-EREBP Transcription Factor Family AT1G53910 46.036 2.24e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Stsc211474g00008 AP2 8.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211474g00008 K09286 - gmx:100818646 411.379