Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211473g00024 ATGCTAGCAATTCTTCAACTAGCAGAAGCACAGACACAACATGTAGTTGGAGGCACTGAGGGTTGGAAGATTCCATCAAATGATTCTGTATATCAAGATTGGGCAAATAACCAGAATTTTTCAGTTGGAGATATCTTAGTGTTCAATTTCGTTACAAACCAACATGATGTGGTTGAAGTGCCAAAAGATTCCTACGACATTTGCAGTCCAGAATTTGCAACGAACACAACAATGAAAGGCCCTGCAAAATTAACCCTTAATAACTCCGGCCAATTCTACTATATTTGCAGCTTTGGTACACATTGCATTCAAGGACAAAAGTTGGCCATTATTGTCTCTAACTCCTCATCCTCCTCCTCTTCTGTGGCCCCTTCTCCACAGTCCTCTTGGTCGCCAGCGGTGATTACTACTACTGCCACCGCCGCTGCTACTTTCTCTTTGATCTTCATCTTTTCATTCATGGTTGTAATTTTATAG 477 0.4151 MLAILQLAEAQTQHVVGGTEGWKIPSNDSVYQDWANNQNFSVGDILVFNFVTNQHDVVEVPKDSYDICSPEFATNTTMKGPAKLTLNNSGQFYYICSFGTHCIQGQKLAIIVSNSSSSSSSVAPSPQSSWSPAVITTTATAAATFSLIFIFSFMVVIL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211473g00024 158 SUPERFAMILY Cupredoxins 12 113 IPR008972 -
Stsc211473g00024 158 Gene3D - 11 125 IPR008972 -
Stsc211473g00024 158 FunFam Cupredoxin superfamily protein 11 118 - -
Stsc211473g00024 158 ProSitePatterns Type-1 copper (blue) proteins signature. 90 106 IPR028871 -
Stsc211473g00024 158 Pfam Plastocyanin-like domain 22 106 IPR003245 GO:0009055
Stsc211473g00024 158 PANTHER BLUE COPPER PROTEIN 12 121 IPR039391 GO:0009055
Stsc211473g00024 158 ProSiteProfiles Phytocyanin domain profile. 12 114 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211473g00024 Stsc-Chr211473 105944 107079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211473g00024 2 112 Phytocyanin Superfamily AT3G20570 37.838 5.89e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211473g00024 - - adu:107472880 218.779