Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211473g00016 ATGATGATTGTTGATGATGAATACATCATTGTGGGATCAGCCAACATCAACCAAAGATCAATGGACGGTGCGAGGGACTCCGAAATTGCAATGGGAGCTTACCAGCCTTACCACTTGGCTACCAGGCAGCCGGCGCGCGGCCAGGTCCATGGTTTCCGAATGGCATTGTGGTACGAGCACCTCGGCATGCTTCATGACTCATTCTTCCGGCCAGAAAGCAAAGAATGTATCAGCAGGGTAAACAAAATTGCTGACAAGTATTGGGACCTCTTCTCTAAGGAGTCACTTGAGAATGACCTTCCCGGCCACCTGCTCCGCTACCCGATCAGCATTTCCGGCGAGGGACATATCACATCGCTTTCAGGATTCGAATGCTTCCCCGACACGAAGGCGAAAGTTCTTGGCGCCAAAGCAGATTACCTGCCCCCTATCCTCACTACTTAG 444 0.5135 MMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLATRQPARGQVHGFRMALWYEHLGMLHDSFFRPESKECISRVNKIADKYWDLFSKESLENDLPGHLLRYPISISGEGHITSLSGFECFPDTKAKVLGAKADYLPPILTT 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211473g00016 147 PANTHER PHOSPHOLIPASE D 1 136 IPR015679 -
Stsc211473g00016 147 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 20 IPR001736 GO:0003824
Stsc211473g00016 147 Pfam Phospholipase D C terminal 66 137 IPR024632 -
Stsc211473g00016 147 SUPERFAMILY Phospholipase D/nuclease 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211473g00016 Stsc-Chr211473 68681 69445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211473g00016 1 147 Phospholipase D Gene Family (Wang group) AT1G52570 78.231 1.45e-82 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211473g00016 K01115 - gmx:100794849 270.011