Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211472g00025 ATGACAATCCATAACAAGTTGAGAGAAGAAATAGGGTGTTCTTACATGCAAATGAAGAATATGATTTTCTGTAGTAAGAAGGCTAAGTTGTTTTTTCCCAATGGAGGGATTCATCCAATAACAAATGAAGTCCTGGAATATGTCCACTTATTTTGTGAGTCACAAAAGAAATGGGAGCCAGTTTTACAAGAATACCTGCTAGGTTCGGACAGAGCTGGAACTTCGTTTTCTTTTTCTGCGGAGATAGTTTCAATGTTGAAGCATTTAGAGAGAAAACTGAGAACTAACTCCAAGAACTACAAGGATCCTGCTTTGTGCTATTTCTCCATCATGATTAATACGAGTGATTGGGTAAAAAATAATAAACAGAAAGCTCAAGAAAACTTTGAGCTCTATTACAGAAGCTCATGGAACAAGGTGATTGATTATCTGAAGCTGCACAACAACAAGTCTTTGGTGCCTGCTGTTGATGCTGAATCAATGAAAGAGAAACTTATCTTGTTCAATTCACACTTCAAGAAGATATGCGCTCTTCAATCTACATGGTTTCTTGATGAAGAGAAAATTAGTAAAGAAATAATAACATCCCTAGAGAACATGTTGCTTCCAGCATATGGAAAATTCATTGGGAAGTTCCATGATGTTCTTGCTAAAGATGCATATGAGTATATTGAGTATGGAATGTTTGATATACAAGCTCGACTCAACGATTTGTTTAGAGGAAGTAGGAATTAG 735 0.3605 MTIHNKLREEIGCSYMQMKNMIFCSKKAKLFFPNGGIHPITNEVLEYVHLFCESQKKWEPVLQEYLLGSDRAGTSFSFSAEIVSMLKHLERKLRTNSKNYKDPALCYFSIMINTSDWVKNNKQKAQENFELYYRSSWNKVIDYLKLHNNKSLVPAVDAESMKEKLILFNSHFKKICALQSTWFLDEEKISKEIITSLENMLLPAYGKFIGKFHDVLAKDAYEYIEYGMFDIQARLNDLFRGSRN 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211472g00025 244 SUPERFAMILY Cullin repeat-like 12 239 IPR016159 -
Stsc211472g00025 244 Gene3D Exocyst complex component Exo70 1 244 - -
Stsc211472g00025 244 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 241 IPR004140 GO:0000145|GO:0006887
Stsc211472g00025 244 Pfam Exo70 exocyst complex subunit 4 237 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211472g00025 Stsc-Chr211472 187925 188710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211472g00025 1 242 EXO70 exocyst subunit family AT5G58430 35.632 1.42e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211472g00025 - K07195 aip:107607033 295.819