Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211472g00024 ATGGTTGCTCTTGTTGTTTTGGAAAGACTAAAAGCACTTGTTAGCGGTTACTTACTCAACATGACACCTCTGTCTGTTCAAATTCCAAGATGGCTTATGCATCCAAAGCTATGGAGATTCCTTGGTTTTGCTTCATCCATAGTTGGATTGCTCTGTTACGCTCTTAGTACACCCTTCAACTTTCTATTCGGAAAATGGAACTTGGTGAAAATCTCTATTTACATTGTTTTCAGTTTTATAATCTGCATTGCCACTTTCTTTACCAAGATATGGCAGCACTCTGCAAGTCTCCGATTGAAAGCTCATATGGCATTTTTAGTTCTGACCATTACTTCTGTTTACTCATTCTTTTTTGATAAAGCTGTGAATGGGAAACCAGATGCATATAGCGTAGTCTCTTGTGCTGCTTTTGCTATTATGTTGTTTAGTTTGTCGAGACAGATCCACTGCGGATTTGAAGTGGATCTTCTATATTTCTTTCTTGGAGTTTTTATTGTTCAACTGATGAAGATAAAACTCTTGTTAGGTATTGTTGGGGTCTGTTTCAGTTATTTCCTTATTATTCTTAGGTCTTCTCTAAACCTCGTATTAGAAGATGAATATTTTGAACACAGTGATCAAAATCAGGTGGTCACCATTCAAGTTGATTCGCAGCAATCCAATGATGGTAGCAGTTTAACGATGCAACGGTTAAGTGCTTATATAGAAAGGCAACAGCGGAGAGACTATGCTATAATCCACAACATTTTCTACCAAGCAAGCAGATACGGTGAATCCATTGATGGACCCGGAAAGGTGATTGACCCCAATTTGGTGGCTGATGCACTTGGACAAATAGCTATAAAGGACCTTCAAGATGTTGCCAATTCCGCCATGGCTGCTGGTAAATTGCAGGAGTCAATGGTTAGAGATGTGCATATTGAGATTGTTGAAGCTTCCAAAGAATACAGGATACTATTTCCCTCCGAAAGGCAAATCTGCAATCGTGTCTTCCCTGGTCACTCTGCAGCGAATGCTTGTTTTGCACAGATTTGCTCTGAAGCAACAATTCAGCTGCTGAAATTCGCAGAGGCCTTCGTGACGTTTAGCCTTTCATCCAATCAAATGATCCAAACCTTCCATGTTTTTCATGCATTGAACCAAATGATTCCGAACATCCAGACATTGTTTTCTGATGACCCCAGCTTGTTCTTGGTGAATGAAGCTGTCACAACCCTTAACAAATTGAGAGAAACAGTCACGGATATGAAGAAATTGATTTTTTGTAGCAAGGAGGCGATGCTAGTTCTTCCAAATGGTGGGGTTCATCTAGTTACCTATAATGTGATGACATATATCCTTTTCATATGGCAATCGCAGAAGAAACTGCAGCTCGTTTCGCTAGAATACCAGATGGATACCGGAGCCAGATCTTCTTTATTTGCTAATATTACTTTGTTGTTGCAGCTATTAGAGAGAAAATTGAGAACCAACTCCAAGAAGTACAAGGACCCTGCTTTGGGCTATTTCTTCATGATGAACAATAGGAGTTACATAGAAAATAGGGTAAAAGAGTGGGAGTTGGGAACCTTTGTGGGAGATCATTGGGCCCAAAATAACACTGCAAAATTCAAGCAAAACCTTGAGCTTTATTACAGAAGCTCATGGAACAAGTTGCTAAACTATCTGAATCTAGACTACTCCAGCGAGTCGCTGGCGCCTGATGTTGCCACAGAGTCAATGAAAAATAAGCTGCTGTTGTTCAACTCGCATTTCATGAAGACATGCATTGTTCAATCTACATGGTCCGTCTTTGACGAGCAGCTAAGGGAAGAAATTAGGACTTCCATTAAAAACATGTTGCTGCCAGCATATGGAAACTTCATTGGGAAGATCCGTAAGTTTCTTGGTATGAATGCTTATGAATATATAAAGTATAGAATGCCTGACATTGAAGCTCGAATCTGA 1947 0.3986 MVALVVLERLKALVSGYLLNMTPLSVQIPRWLMHPKLWRFLGFASSIVGLLCYALSTPFNFLFGKWNLVKISIYIVFSFIICIATFFTKIWQHSASLRLKAHMAFLVLTITSVYSFFFDKAVNGKPDAYSVVSCAAFAIMLFSLSRQIHCGFEVDLLYFFLGVFIVQLMKIKLLLGIVGVCFSYFLIILRSSLNLVLEDEYFEHSDQNQVVTIQVDSQQSNDGSSLTMQRLSAYIERQQRRDYAIIHNIFYQASRYGESIDGPGKVIDPNLVADALGQIAIKDLQDVANSAMAAGKLQESMVRDVHIEIVEASKEYRILFPSERQICNRVFPGHSAANACFAQICSEATIQLLKFAEAFVTFSLSSNQMIQTFHVFHALNQMIPNIQTLFSDDPSLFLVNEAVTTLNKLRETVTDMKKLIFCSKEAMLVLPNGGVHLVTYNVMTYILFIWQSQKKLQLVSLEYQMDTGARSSLFANITLLLQLLERKLRTNSKKYKDPALGYFFMMNNRSYIENRVKEWELGTFVGDHWAQNNTAKFKQNLELYYRSSWNKLLNYLNLDYSSESLAPDVATESMKNKLLLFNSHFMKTCIVQSTWSVFDEQLREEIRTSIKNMLLPAYGNFIGKIRKFLGMNAYEYIKYRMPDIEARI 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211472g00024 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 316 645 IPR004140 GO:0000145|GO:0006887
Stsc211472g00024 648 Pfam Exo70 exocyst complex subunit 313 648 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc211472g00024 648 SUPERFAMILY Cullin repeat-like 294 648 IPR016159 -
Stsc211472g00024 648 Gene3D Exocyst complex component Exo70 198 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211472g00024 Stsc-Chr211472 179216 181253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211472g00024 266 648 EXO70 exocyst subunit family AT5G58430 37.705 1.53e-70 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211472g00024 - - adu:107458221 914.835