Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211472g00023 ATGATGCTTAGGCCCCTGCTCATCCAAACTCAAAGCTACCTCTTGCAGCCACGTGTATGGAGATTATTGGGTTTCGCATCAACCCTTGTTGGATTCATCTCCTACGCTCTCAGCTCCTCCTTCCACCAACTCTTCGGAGCTTGGACTTCATTCAAAATCTTTGCCTACATCATCTTCAGTTTCATCATTTCTGTCGTGATTTTGTTTCCAAAATCATGGCAACAACTAAGGGGCCTCAACTTTGAAGCACACATGGCCTTCTTCGTTTTGACCATCACCTCTCTCTATTCCTACTTTTCTGATAAAGCCATGAAAGGGAAGCCAGATGCTTATAGCGTAACATCCTATGCTGCTTTTGCTGTTACATCGCTTAGCTTGCAGAGGCAGAGTAAGTCTCAATTTGGATTTGAAGTTGATTTGCTGTATTTCTTCTTAGGATGTGTGATTGTACAGTTCATGAAGATACAATTGTGGTTAGGGTTTGTTGGAATTTGTTTCAGTTATTCCTTAATCATTCTTCGTTCCTCTTTAGATGCACCCGCACAAAACCGGTATCAAAGATCCCATGTTCAACAGCATCTTGCTGTTCAAGTAAATATGAATCCATTGCAAGTGAACAATAGGAGTAGTATGATCCAACAAGCTCAACAGAGTGATGCACATGCGGGTCTGGAAGCGAGTATGGAGGAGCGTCTGTGGGCTGATTTGGCTGTTGTGAACATGCTTAAGTGCAATTTGAATAATTACCTTCAAGATAAGGTTGATCGGGTTCCGGAGGTGCTAGCCAATGATAATAACTTCCTGATTGATGAGATTCCATCACAACTACTTATTGACCTTGAAGAAAGCATACAAACAAAGATTTTAGGTGGGTTAGACAAGGAGTGTGTAGACCAATACTGCAGCTGGAGGAAACAGTTCTTACAGTTTGTAGAGAAGGAGCTTAGCACACAAGAAATCGACGAGAAGAGGAGGGTTATGAGTTGGATTAAAGTTTGCAATATTTCTCTCAAGATATTGTTTCCAAATGAAAGGAGACTCTGTGATCGCATCTTCTTGGGGTTTCCTTATCTCGCGAATTATTCTTTCGCGCAGATTTGCAGTGAATTCACCATTAATCTGCTTGATTTCGCCAATGGTTTTGCTAACGGTAGCCATCCGCTAAATCTTTTGCCCAGTGTCCTCCAAGTGTTCGGTGTATTGCATGAACTAATTTCAGAATTTGATTCGGTGTTTTTCGACCAATTCAGTGTGTTACTTAGGAATGAAGCAGTCTCGACTGTAATGAGACTAAGGGAAGCAATCAACGAGATGTTCATGCAGCTTGAGAAGTTGATAAATTGTGATACATCGCAAGCAGCTTGTATTGGAGGTATTTGCCCCATTTCCATTGAAGTGATGAACCATCTTAGCACAGTTGGGGAGTTTGGGTCTTCTTGGCTTTCTGCGGAGCAAAGAACTGCTAAAGTCCGAGAAAACTGTGAAAACTATAGAAGAAGCTCGTGGAAAGAGGTGTTAAGCATTTTGAAACTTGGCACAGAGCAAATTGAAGAAGCGGAGTCAATGAAGAAGAAGCTCAATCTGTTCAACTTCAAGTTTAACCAGATATGGATGGATCAGAGTGCATGGTTTATCCATGATGAAGAGCTGAAGGAAGAGACAATAACACCGCTGGGAAAGATCATATCTCATACATATGGATTGTTCATTTGGAGTTTCAACAACGTGCTTGGTAAGGATGCTAATGAGTTTATCAAGTATTCAGTTTTAGACATTGAAGACCTACTGAAGGATTTATTTGGTTGGAGAGATGAATAA 1818 0.4114 MMLRPLLIQTQSYLLQPRVWRLLGFASTLVGFISYALSSSFHQLFGAWTSFKIFAYIIFSFIISVVILFPKSWQQLRGLNFEAHMAFFVLTITSLYSYFSDKAMKGKPDAYSVTSYAAFAVTSLSLQRQSKSQFGFEVDLLYFFLGCVIVQFMKIQLWLGFVGICFSYSLIILRSSLDAPAQNRYQRSHVQQHLAVQVNMNPLQVNNRSSMIQQAQQSDAHAGLEASMEERLWADLAVVNMLKCNLNNYLQDKVDRVPEVLANDNNFLIDEIPSQLLIDLEESIQTKILGGLDKECVDQYCSWRKQFLQFVEKELSTQEIDEKRRVMSWIKVCNISLKILFPNERRLCDRIFLGFPYLANYSFAQICSEFTINLLDFANGFANGSHPLNLLPSVLQVFGVLHELISEFDSVFFDQFSVLLRNEAVSTVMRLREAINEMFMQLEKLINCDTSQAACIGGICPISIEVMNHLSTVGEFGSSWLSAEQRTAKVRENCENYRRSSWKEVLSILKLGTEQIEEAESMKKKLNLFNFKFNQIWMDQSAWFIHDEELKEETITPLGKIISHTYGLFIWSFNNVLGKDANEFIKYSVLDIEDLLKDLFGWRDE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211472g00023 605 Gene3D Exocyst complex component Exo70 204 475 - -
Stsc211472g00023 605 PANTHER EXOCYST COMPLEX PROTEIN EXO70 484 600 IPR004140 GO:0000145|GO:0006887
Stsc211472g00023 605 Pfam Exo70 exocyst complex subunit 484 598 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc211472g00023 605 Pfam Exo70 exocyst complex subunit 328 477 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc211472g00023 605 Gene3D Exocyst complex component Exo70 476 601 - -
Stsc211472g00023 605 SUPERFAMILY Cullin repeat-like 256 600 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211472g00023 Stsc-Chr211472 176475 178457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211472g00023 485 600 EXO70 exocyst subunit family AT5G58430 38.017 1.07e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211472g00023 - - adu:107458262 890.567