Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211472g00019 ATGCATCCGGATCTATGGAGATTCATTGGTTTTGCTTCATCCATAGTCGGACTGCTCTGTTATGCTCTCAGTACATCCTTCAACTTTCTCTTTGGAAAATGGAACTTGGCGAAAATATCAGTTTACATTGTTTTCAGTTTTATAATCTGCCTTGCCACTTTCTTTGCCAAGGGGAAACCAGATACATATAGCATAGTTTCTTGTGCTTCTTTTGCGATTATGTCGTTTAGCTTGTCAAGACAAATTCACTGTGGATTTGAGGTAGACATGTTATATTTCTTTTTGGGAGTTCTCATAATACAACTGATGAAGATAAAATTGTTGTTGGGTATAGTTGCCATATGTTTCAGTTATTTCCTCATCATTCTTCGATCCTCTCTAGATGCACAAACATTCACAGTCACAGATAGTGAATATTTGGAACTCCTGGATCAAAATCATGTGGCAATTCAAGTGGAATCTGGTCCACAACAATCCAATAGTGATAGAGTCATCATGACAAAGTTCATGGATTGTGTTGAGGCACTTGAGCAAAGAAATTCTTCACTAGTGCAAACCATTTCTGAGGAATACAAAAATGCTCCTTATAACTCTGGTTTGGTGACTGACAACAACTTCTTGCTTGACATGCTGCCACAAGGAATTGTAAATGACCTTCATGAAGCTGCCAAATCGGCAATGGCTGTTGGATTGGAGAAGGAGTGCTCTGATGCCTACATCAATTGCCGGAGGGAATGCTTGGAAGAGTGTCTAACAAGCTTGTTGCATTTGGGCACTATCGAAATTGGCCACACTAACAAAGCTACATCTCTAAATTTCATGGTAAGGAGATGGGCTGTAACATGCAATGTTGCTCTCAAAATACTGTTTCCGTCCGAAAAACAACTCTGCCACCGTGTCTTCTTTGGGCTACGTTCCAGTGCTGACGTTTGTTTTGCAGAGATTTGCCGGGATTCAACGACTCACCTGTTAAATTTTGCTGATGCCTTTGCAAGTGAGTCAGATTTCATCATAACCAAAAGCATTTTTGATACATTACATGACCTGATTCCACATTTCCAATCATTATTTTATGACAACCCAACAATGTTCTTAGTAAACGAGTCTATCACAATATATAACAAGTTGAGAGAAGAAATAGGGGGTTCTTGTATGCAAAAGAAGAGAATGATTTCCTGCAGTAAGCAGGCTAAGTTAGTTCTTCCCAATGGAGGGATTCATGGAATGACAACAGAAGCCATGAGATATTTCAAGTTATTCTGTCTGTCACAAGAGAAATGGGATCCAGTTTCACAAGAATACCTCCATGATTCTGACAGAGCTGAAACATCGTTTTCATTTTCCCCCGAGATGGTTTCAATGTTGAAGCTTTTAGAGAGAAAACTGAGAACTAACTGCAAGAACTACAAGGATTCTGCTTTGCGCTATTTCTTCATGATGGTTAATAGGAGATTCATACAAATGTTTCTAGAAGAATGCCATTTGATAACCTATTTGAGCAATGATTGGTTCCAAAATAATGCACAGAAAGCTCAAGAAAACCTTGAGCTCTATTACAGAAGCTCATGGAACAAGGTGGTCGATTATCTGAAGCTGTGCAACGATGAGTCTTTGGAGCCTGATGTTGCTACTGAACCAATGAAAGAGAAACTTCTTTTGTTCAATTCACACTTCAAGAAGATATGTTCGCTTCAATCTACATGGTTTCTTCATAAAGTGAAAATTAGGAAAGAAATAATAACATCCGTCGAGAACATGTTGCTTCCTGCATATGGAAAATTCATTGGGAAGTTCCATGATGTTCTTGCTAAAGATGCATATGAGTATATTGAGTATGGAATGTTTGATATACAAGCTCGACTCAACGATTTGTTTAGAGGAAGTAGGAATTAG 1893 0.3856 MHPDLWRFIGFASSIVGLLCYALSTSFNFLFGKWNLAKISVYIVFSFIICLATFFAKGKPDTYSIVSCASFAIMSFSLSRQIHCGFEVDMLYFFLGVLIIQLMKIKLLLGIVAICFSYFLIILRSSLDAQTFTVTDSEYLELLDQNHVAIQVESGPQQSNSDRVIMTKFMDCVEALEQRNSSLVQTISEEYKNAPYNSGLVTDNNFLLDMLPQGIVNDLHEAAKSAMAVGLEKECSDAYINCRRECLEECLTSLLHLGTIEIGHTNKATSLNFMVRRWAVTCNVALKILFPSEKQLCHRVFFGLRSSADVCFAEICRDSTTHLLNFADAFASESDFIITKSIFDTLHDLIPHFQSLFYDNPTMFLVNESITIYNKLREEIGGSCMQKKRMISCSKQAKLVLPNGGIHGMTTEAMRYFKLFCLSQEKWDPVSQEYLHDSDRAETSFSFSPEMVSMLKLLERKLRTNCKNYKDSALRYFFMMVNRRFIQMFLEECHLITYLSNDWFQNNAQKAQENLELYYRSSWNKVVDYLKLCNDESLEPDVATEPMKEKLLLFNSHFKKICSLQSTWFLHKVKIRKEIITSVENMLLPAYGKFIGKFHDVLAKDAYEYIEYGMFDIQARLNDLFRGSRN 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211472g00019 630 PANTHER EXOCYST COMPLEX PROTEIN EXO70 138 627 IPR004140 GO:0000145|GO:0006887
Stsc211472g00019 630 Pfam Exo70 exocyst complex subunit 277 623 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc211472g00019 630 SUPERFAMILY Cullin repeat-like 165 625 IPR016159 -
Stsc211472g00019 630 Gene3D Exocyst complex component Exo70 129 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211472g00019 Stsc-Chr211472 136902 138896 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211472g00019 201 628 EXO70 exocyst subunit family AT5G58430 39.310 2.99e-93 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211472g00019 - - aip:107607033 798.505