Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211472g00016 ATGGCCTTCTTCGTTTTGACCATCACCTCTCTCTATTCCTACTTTTCCGATAAAGCCATGAAAGGGAAGCCAGATGCTTATATCGTTACATCCTATGCTGCTTTTTCTGTTACTTCCCTTAGCTTGCAGAGGCAGAGTAAGTCTCAATTTGGATTTGAAGTTGATTTGCTGTATTTCTTCTTAGGATGTGTGATTGTACAGTTCATGAAGATACAATTGTGGTTAGGGTTTGTTGGAATTTGTTTCAGTTATTCCTTAATCATTCTTCGTTCGTCCTTAGATGCACTTGCAAAAAACCGGTATCGAAGATTCCAAGATGAGCATCATCTTCTTCTTCAAGTGAATACGAATCCATTGCAAGTTAAAAATGATATTAATAGCAATCTTGTTAGCAGTAATAATATGCCTCAAAATACTCAGCAGCTGGATGAACAGGTGGCTATCGAAGCGAATGTCTTGCCGAGTATGGAGGACTGTAGGTGGGCTAATTTGGCTGCTGTGAACATGCTTAAGTGTAACCTGAACAAATACCTTCAAGATATGGTTCATCGGATTCCAGAAGTACTAGTGAATGATCATAACTTTCTGATTGATGAGCTTCCATCACAATTAGTTAGTGACCTTCATGAAAAAGTGAAGCTCATGATCCAAAAGGGGCTTGAGAAGTTGTGTGTGGACCAATACTGCAGTTGGAGGAGAGAGTTCTTAGATTTGGTGGGGAAGGAGCTTAGCACGCAAGAAATAGGAGAGAAGGGGAGGATTAAGAGTTGGATTAAAGTTTCAAATGTTTCTCTTAAAATATTGTTTCCTAATGAAAGGAGACTCTCTGATCGCATCTTCTTGGGTTATCCTTCTGCTGCCGATCGTTCTTTCGCACAGATTTGCGGTGAATTCACCTCTAATCTGCTAGATTTTGGCAATGGTTTTGCTAATGGTAGCCATCCACTAAATCTTTTTCCCAGTGTCCTCCAAGTGTTCGGTGTATTGCATGAACTAATTCCAGAGTTTGAGTCAGTTTTTTTGGACCAATTCAGTGCATCGCTTAGGACTGAAGCAGTCACCACCCGAAAGAGACTAAGGGAAACAATCAACGAGATGTTCACGCAGCTCGAGAATTTGATAAATTGTGATGCATCAGAAGTAGCTTGTCCTGGGGGTATTTGCCCTGTTTCCGTTGAAGTGATGAACCATCTTAGTGCGGTTGGAGAATTTGGGTCTTCTTTGCTTTCTGGGGAGGTAACTAGAATAATTGCATTGTTGGAAAGCCATCTGGAAGCCAAGTCCAAACATTACAGCAACTCAGCTTTGGGCTTTGTTTTCTTGATGAATAATGAGAGGTACATTGAAAAGAAGGCAAAACAATATCAATTGGATAAGATTTTGGGCAATCAATGGATCCGGCAAAGAACTGCTAAAGTCCGAGAAAACTGTGAACCCTACAGAAGAAGCTCGTGGGAAGAGGTGTTAGGCTTTTTGAAACTTGGCACGGAGGAAATTGAAGAAGCAGAGTCAATGAAGAAGAAGCTCAATTTGTTCAACTTGCAGTTTAACCAGATATGGAGGGATCAGAGTGCATGGTTTATCCACGATGAAGAGTTAAAGGAAGAGATAATAACATCGCTGAGAAAGACCGTGTCTCATTCCTATGGATTGTTCATTTGGCGTTTCAACTATGTGCTTGGTAAGGACGCTAATGAGTTTATCAAGTATTCAGTCTTAGACATTGATGACCTACTGAAGGATTTATTTGGCTGGAGGGATGAAAAACTAGTAGAAATGGAAGATTAA 1788 0.4049 MAFFVLTITSLYSYFSDKAMKGKPDAYIVTSYAAFSVTSLSLQRQSKSQFGFEVDLLYFFLGCVIVQFMKIQLWLGFVGICFSYSLIILRSSLDALAKNRYRRFQDEHHLLLQVNTNPLQVKNDINSNLVSSNNMPQNTQQLDEQVAIEANVLPSMEDCRWANLAAVNMLKCNLNKYLQDMVHRIPEVLVNDHNFLIDELPSQLVSDLHEKVKLMIQKGLEKLCVDQYCSWRREFLDLVGKELSTQEIGEKGRIKSWIKVSNVSLKILFPNERRLSDRIFLGYPSAADRSFAQICGEFTSNLLDFGNGFANGSHPLNLFPSVLQVFGVLHELIPEFESVFLDQFSASLRTEAVTTRKRLRETINEMFTQLENLINCDASEVACPGGICPVSVEVMNHLSAVGEFGSSLLSGEVTRIIALLESHLEAKSKHYSNSALGFVFLMNNERYIEKKAKQYQLDKILGNQWIRQRTAKVRENCEPYRRSSWEEVLGFLKLGTEEIEEAESMKKKLNLFNLQFNQIWRDQSAWFIHDEELKEEIITSLRKTVSHSYGLFIWRFNYVLGKDANEFIKYSVLDIDDLLKDLFGWRDEKLVEMED 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211472g00016 595 Gene3D Exocyst complex component Exo70 137 589 - -
Stsc211472g00016 595 SUPERFAMILY Cullin repeat-like 166 583 IPR016159 -
Stsc211472g00016 595 PANTHER EXOCYST COMPLEX PROTEIN EXO70 96 583 IPR004140 GO:0000145|GO:0006887
Stsc211472g00016 595 Pfam Exo70 exocyst complex subunit 405 581 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211472g00016 Stsc-Chr211472 115728 117896 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211472g00016 190 583 EXO70 exocyst subunit family AT5G58430 43.357 8.03e-97 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211472g00016 - - adu:107458262 993.03