Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211472g00015 ATGCCAGCCCGGAATTCCTACCATCTAAACCAGAAAAGGGTATGGAGATTTGTGGGATTTATGTCAAGTGTCAACGGATTTCTCTGTTATGCTATGAGTTCCTCTTTCAAACATCTTTTTGGAGAGTGGAACTTGTTGAAGATCGTTGTTTACACTCTATTAAGTTTCAGCATCAGCACCATCATGCTATTTCCCAAGAAATGGAAGCTTTCAAGGAGCTTCTTGCTGAAAGCTTATGTTGGTGTTCTAGTTTTGCTACTAACTTCTCTATACTCATTTTTCTCTGATAAATCTGACAATGGAAAACCTGACCTGCTAACCATTTTTTCAAGTGCTTCTTTTGCTTTGATGTCTTTGTCCCTTTCGAGGCAAATTGATCTCGGCTTTGAATCTGAGCTCCTCAGTTTCTTCCTTGGATGCCTAACTGTTCAACTCATGAAGATCAACTTGATGCTTTCCATCATTGCAGCCATCTTTTGCTACTCTCTCATGATTCTTCGTTCCAAATGGGAATCTCAACGGCATGTTGGAACACCAAGAATTCAAGACCATGTAACAGTAGAAATCGACACTGCAAATGGAGTAGTTGAAAGAAGAGTTGATGACTACTTAAATTCCTCTCAATACCTCGAACAACAAAATCAGGATGATGGATGCAATTGGAGAAAATATGAAGAGAAACCACTGAGAGGAAGGGGAAATCAGATAAGCTACTACAGATGCGTGCACCCGAATTGCAAGGTCAAGAAGAAAGTAGAGAGAACAATAGATGGAGAAATTATTCATGTAAACTATAAAGGTACCCGTGTCCACCATTTTTGCAAGCCTACTATGAAGAGGAACTCATCATCTGAATCATTTTATGCACTTCTCCCTTCTGACCCTTCCCACGCTGAAATCATAGATCAATCATTGGCCTCCAATGGCAATGGAAAATTGAATCATGTTACAGAAGAACCAGAGAGCTCATCATTATCAATATGA 984 0.3963 MPARNSYHLNQKRVWRFVGFMSSVNGFLCYAMSSSFKHLFGEWNLLKIVVYTLLSFSISTIMLFPKKWKLSRSFLLKAYVGVLVLLLTSLYSFFSDKSDNGKPDLLTIFSSASFALMSLSLSRQIDLGFESELLSFFLGCLTVQLMKINLMLSIIAAIFCYSLMILRSKWESQRHVGTPRIQDHVTVEIDTANGVVERRVDDYLNSSQYLEQQNQDDGCNWRKYEEKPLRGRGNQISYYRCVHPNCKVKKKVERTIDGEIIHVNYKGTRVHHFCKPTMKRNSSSESFYALLPSDPSHAEIIDQSLASNGNGKLNHVTEEPESSSLSI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211472g00015 327 Pfam WRKY DNA -binding domain 216 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211472g00015 327 Gene3D WRKY domain 203 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211472g00015 327 MobiDBLite consensus disorder prediction 307 327 - -
Stsc211472g00015 327 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 206 288 IPR044810 GO:0003700
Stsc211472g00015 327 SMART WRKY_cls 215 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211472g00015 327 SUPERFAMILY WRKY DNA-binding domain 210 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211472g00015 327 ProSiteProfiles WRKY domain profile. 210 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211472g00015 Stsc-Chr211472 113163 114374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211472g00015 196 276 WRKY Transcription Factor Family AT2G38470 44.444 4.86e-16 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211472g00015 WRKY 3.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211472g00015 - - ccaj:109792596 371.318