Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211472g00014 ATGGATTTTTTTGCGTTTTGCTTCAGCCGTACTTGGATTGCTCTGTTACGCTTTGAGTTCCTCCTTCAACTCTCTGTTCGGGAAATTGAACTTACTGAAAACGTTTCTTTACGGTGTCTTCAGTTTCATCATCTGCACTGCAGTTTTATTTGTAAAGGTATTGCTCCATTTTATCTTATACGGATCTTGATAACAAACTGCAGAAGACAAGAGGCTTTTACCACCAAAAATGTTATAGAGATTCTTGCTGTATCTCATGGGGCTAGTAATCTCCAACTAAAAGCTCATCTGGCATTTTTGGTTCTGATTATTACATCTTTCTACTCCTTTTACTTTGATAAAGCTGTGAATGGGAAACCAGATGCATACTCTATAGTTTCTTGTGCTTCTTTTGCTGTCATGTTTCTTGGCTTGTCAAGGCATAGTCACTGTGGATTTGAAGTAGACTTGCTCTATTTCTTTCTCGCGGCTCTAACAATACAGCTCATGAGGATAAAGTGGTTTCTTGCTATACTTGGAGCATCTTATAGCTATGCTCTCATCATGATCCATACCCGCTTGGATGCTCATCAAGAAATGAATGGATATCATGGAGTCCCAGAAGAGCCTCATGTCATTCAAGTAGATCCACCAGAATTGCCATTAAATGCTAGCAATACACAAGACAATGCAATCACTGAAGTTGATTCGCATTTGCAAGAAGACAATAGCAATTTTGCTCTCATCAAGCCACGCCTCTTGTCTTCTCTAAAGGCCCTTAAGAAGCAGAATCAAAAGCTTTTAGGCCTACTTTACAGCCAAACACTGGTGGAGCCTTTTCATCGTGATGAAAATTTGTTAATCGACACGCTTCCACGCGAAATTATCAACAACATCAATGAAACTTTTAAGATGGCACTGGCTGCTGGATTTGAGAAGGAGTGTTGCCACTTATACAGCAGTTGCCGCTGGGAGTTCTTGCAGCAGTTTCTTTCAGAATTAGAGTTGAAACAAGCACAAAATAAGGACCAAATTGTTTTCATGTCACAAGTTTTAAGCTCTCTCCGCGTACTATTTCTGAATGAACGCAGGCTGTGTGATCGAATCTTCTTCGGATTCTCCTCAGCTGGGGATCTCTCTTTTGTGCTGGTTTGCAAGGAACTCACCATTCATCTACTAAACTTGCTCAATACAATAGTTGTTGGCATCCATTCGCCACCAGCCATGTTTAGAAGAGTGGTGAATATGTTTGATGAATTAAGTGATATGATTACCGAGTTAGAATTGCTATTTCCTGATCCAGAAGGTGCATTGCTTAGAAGCGAAGCTGTCAAGGCAAGAATGAGACTAGGTGAGACAATAAGAGATGTTTTCAAGAACTTGGAGAACATGATTCACTGTGATTCAGCCATTGCAGATGTTCCAGGAGGCATTGAACCAATCACCTGCGATGTAATGAATGCTCTTGGTGCAATGGTTAGAGTAATGCCTATGATTGAGAAAGCTTTCAAAGAATATCCTACAATTGATAGTAGAGGAGGAACACGTTCTTCATTTCCTGCCAAGATAGCTTGGATAACAGAGATGTTGGAGAATCATTTGGAAGCTAAGTACAAAATTTACACTGGAACTTCCTTGGATTATGTGGCCATGATGAATAACACTATGTATATAAAACAAGAGACACTGAAACATTTCCCCTCTGCTCGATTTATGGACTTCGGCAGAGTTAAACGATATAGTTTTGCTGAAATTTGGGGCGATGATTGGATACAAAAGCACACAGAAAAGTTCCAGCAAAACCTTGAAGAGTATCAAAGAAGCTCATGGAATGAACTGCTAGGCTTGTTGAAGCTAGACAACAACAACAATAATGAAACAATGGCAAATGATGTGGCAATTGAGTCCATGAAAGAGAAGCTAAAATTGTTCAACATTCGATTTGAGGAGATGTGCTGCACTCAATCTAAATGGTTTGCGTGCTATGAAATTCGCAAAGAGATAATTGTATTAATAGAAAACATGCTGTTGCCGGCATATGGAAGTTTTGTTGGAAGGCTCCAGGATGTTCTAGGTAAGGCTGCTTATGACTATATAGAGTATGGAATGCTTGACATTAAAGCTCGGCTCAACCGTTTATTTCTCGGAGGCAAATGGATGAGCCGGTAG 2148 0.3999 MDFFAFCFSRTWIALLRFEFLLQLSVREIELTENVSLRCLQFHHLHCSFICKGIAPFYLIRILITNCRRQEAFTTKNVIEILAVSHGASNLQLKAHLAFLVLIITSFYSFYFDKAVNGKPDAYSIVSCASFAVMFLGLSRHSHCGFEVDLLYFFLAALTIQLMRIKWFLAILGASYSYALIMIHTRLDAHQEMNGYHGVPEEPHVIQVDPPELPLNASNTQDNAITEVDSHLQEDNSNFALIKPRLLSSLKALKKQNQKLLGLLYSQTLVEPFHRDENLLIDTLPREIINNINETFKMALAAGFEKECCHLYSSCRWEFLQQFLSELELKQAQNKDQIVFMSQVLSSLRVLFLNERRLCDRIFFGFSSAGDLSFVLVCKELTIHLLNLLNTIVVGIHSPPAMFRRVVNMFDELSDMITELELLFPDPEGALLRSEAVKARMRLGETIRDVFKNLENMIHCDSAIADVPGGIEPITCDVMNALGAMVRVMPMIEKAFKEYPTIDSRGGTRSSFPAKIAWITEMLENHLEAKYKIYTGTSLDYVAMMNNTMYIKQETLKHFPSARFMDFGRVKRYSFAEIWGDDWIQKHTEKFQQNLEEYQRSSWNELLGLLKLDNNNNNETMANDVAIESMKEKLKLFNIRFEEMCCTQSKWFACYEIRKEIIVLIENMLLPAYGSFVGRLQDVLGKAAYDYIEYGMLDIKARLNRLFLGGKWMSR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211472g00014 715 Pfam Exo70 exocyst complex subunit 345 704 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc211472g00014 715 SUPERFAMILY Cullin repeat-like 241 707 IPR016159 -
Stsc211472g00014 715 PANTHER EXOCYST COMPLEX PROTEIN EXO70 256 708 IPR004140 GO:0000145|GO:0006887
Stsc211472g00014 715 Gene3D Exocyst complex component Exo70 215 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211472g00014 Stsc-Chr211472 110412 112726 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211472g00014 276 709 EXO70 exocyst subunit family AT5G58430 43.237 1.93e-102 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211472g00014 - K07195 aip:107607041 632.098