Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211472g00011 ATGCCTGGTTCTTCCTTGCCAGACCAAATTAAAAATTGGGTGCAGCAGAGGCCACATAAATGGTGGTTAATTATGAGTATCATATCAGGTGCAGTTGGACTCATCTGTTTTGTTGTTAGCTTCTTCAACCATCATCTCAAAGCATGGAACCTTATGCTGAAACTCTCCGTCTCCATTGCTTGCATTGCCCTCATCTTTGTTACAGTTTTATTTGCAAAAAATTTGCTAAAGGGAAGCATTCCTTGGATTAGAGCGCATTTGGTATTTTCTGCCATTATAGCCACCTATATCTTCACCTTTCTTGACAAAGAACAAGAGAAGGAAGCAGATATATATGGCCTAGAATCCTACGCTTCATTTGCTGTGATGTTTTTAAGTCTAGCAATACATACTCAACTGAGATTTTTAGGAGAAACCGTGTACTTCTTTCTTGGAGTTCTAGTTGTACAACTCATGAAGATAAAATGGTGGTTGGTTTTCCCTGGAGCTTGCTTCAGTTATCCACTCATCATTTTTTCTTCAATTATAGATGAACTTTCAGAAGAACGTGATCGCCTCGCCATTCAAACGCCTCCACAACTCAATACAGATATTGTTCCTCTTATAGTTTCTCAACCAGTTCAGCATAATGATCTCGTAGCCAGCTTCAGGCATGCTCTACGGAAACTCAATGGATTCGATAGGGTACTTGTCAGGGAGTTACAACACCCCTTGAAGGATTACATAACATATATGATTGACCAGGTTCCAGAGGCATTGGTAAATGACCCCAACTTCCTAGCAGATAGGATTTCGCCACAGGTGGAATCACAGTTGAATGTGCATCAAAAGAAAAACAAAATGGAAAAGGAGAGGATCAAGAAGTGGATTAAGGTTTCCAATATAGCATTGAGGATACTGTTTCCTAATGAGCGGAGACTCTGCCATCGAGTCTTTGGCTCCTCCTTTGACATCTCAAATAAGTGTTTCATGCAGATTTGCTCTGAATTGGCACGGATTTTACTTGATTTCGCGGATCATTTTGCAAAGAATAGCCTCGAATATAAGAAGAGTCATTATCTGCTCCTCCTTCTCCAAGTGTTCAGAACACTGCAATATGATCTAATTATTCCATCTTTTGAGTTACTGTTTCCTAATATTCCATTCAGCGATTCACTCTGGACTGAAGCAATCAACGTTAAAGAAAGATTGTGTAGAGCAATTAAGGATTACTTTTTCACGGGGTTGGAGGACGATGGAAAAAGAGGGTCATTCAGAGGATATGGAATTCATCAGAGTACTGTCCAAGTAATGGACCGCCTCGGGACGCCTTCAATGAAAGAGACACCCTTGAATTAA 1338 0.4028 MPGSSLPDQIKNWVQQRPHKWWLIMSIISGAVGLICFVVSFFNHHLKAWNLMLKLSVSIACIALIFVTVLFAKNLLKGSIPWIRAHLVFSAIIATYIFTFLDKEQEKEADIYGLESYASFAVMFLSLAIHTQLRFLGETVYFFLGVLVVQLMKIKWWLVFPGACFSYPLIIFSSIIDELSEERDRLAIQTPPQLNTDIVPLIVSQPVQHNDLVASFRHALRKLNGFDRVLVRELQHPLKDYITYMIDQVPEALVNDPNFLADRISPQVESQLNVHQKKNKMEKERIKKWIKVSNIALRILFPNERRLCHRVFGSSFDISNKCFMQICSELARILLDFADHFAKNSLEYKKSHYLLLLLQVFRTLQYDLIIPSFELLFPNIPFSDSLWTEAINVKERLCRAIKDYFFTGLEDDGKRGSFRGYGIHQSTVQVMDRLGTPSMKETPLN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211472g00011 445 PANTHER EXOCYST COMPLEX PROTEIN EXO70 270 434 IPR004140 GO:0000145|GO:0006887
Stsc211472g00011 445 Gene3D Exocyst complex component Exo70 259 439 - -
Stsc211472g00011 445 Pfam Exo70 exocyst complex subunit 287 435 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc211472g00011 445 SUPERFAMILY Cullin repeat-like 245 434 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211472g00011 Stsc-Chr211472 97990 99444 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211472g00011 236 434 EXO70 exocyst subunit family AT5G58430 32.035 4.51e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211472g00011 - - adu:107458225 506.523