Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211472g00009 ATGCCTAATTTCTTTCACGAAAGCAAGCCTGTTTCTTCCCGGCTAGACCAATTTAAAAAATGGGTGCTGCAGAGGCCACATGAATGGTGGTTAGTTACGAGTCTCCTGTCAGGTGCTGTTGGACTCATCTGTTTTGCTGTCAGCATCTTCAACCATCAGCTCAAAGGATGGAACCTGATGCTGAAATTCTTCATCTCCCTTGTTTGCATTGCCCCCATGGGTATTGCAGTTTTATTTGTAAAAAAATGGCCAAAGGGGAACAAACCTTGGTTTAGAGCTCATTTGGTATGTTGCGCCATTATAGTCACATATATCCTCACCTTCTTTCTTGACAAAGAAAAAGAGGAGGGACCGGATGTATGGCGCCTGGTATCCTATTTTGCATTTTCTTTGACGTCTTTAAGTCTAGGAATGCAGACGAAACTCGGATTTCTAGGAGAAGTGGTATACTTCTTTCTTGGAATTCTTCTTATAGGACTCATAAAGATAAGATGGTGGTTGGTTTTCCCGGCAGCATTATTCAGTTATATAATCATCATTCTTTATTCATTTCTAGATGAACTAAAAGAAGAACGTTATCGCATCCCCACTACAACAACTTCATCACCAGCTGCAATGACTCCATCAGCTCCAGTACTCGTTACCAAAACTTCTCATCTTGAAGATACCTCTTCTATCGGCTTTTGCACTCAAATGTGTCCGCAACAATCTACTGATACCGATAATGAAACTGTTCCTCTTATAGTGCCTCAACCAGTTCCGGTTGATTTCGAATTAAAGTTCACTGGTCTTCTAAGTTGGCTTAATGAAAAGGATTGGGAACTTGTCCAAGAGTTAGAGCGCCCCTTGAAGAATTACGTTGAAGGTAGTATTGAGCAGGTTCCAATGGCGTTGATAGAAGACCCCAACTTCCTTAAGGATAGGATTCTGCCACAACAGATACTTGAAGGGCTGAATGAATTGATGATGAATTGTGGCCACTTTGGAGAGTACATGAAGAATTTGGTGGTGGATAAGTACAGCAAAAGTCGGAGAATGTTCTTGAAGAGATGCCAGGAGGAGCTACAGTTGAAAGTGACGCGACCATCACATGAGCTCAACAAGGAAAACGATAAGGAAAGGATCATGAAGTGGACCAAACTTTCCAACATAGCATTGAGGGTACTATTTCCTAATGAACGGATGATTTGCGATCGAGTGTTTGGCTCCTCCTCTGACATCTCGTTGAAGTGTTTCAAGCAGGTTTGCTTGGAATTAGCACGAGATTTGGTGTTTTTTGTGGATCAAGTTGCAGCGAATACCGTTCAATATCAACAAAGTGACTATTTGCCCCATCTTTTCCACATGTTCAGAACACAAAATGATCTAATTATTCCATCATTTGAGTTACTGTTCTCTGATACTCAATTCAGCGATTCACTCTGGACTGAAGAAAAATTGCGGAGAGCAATTAAGGATTACATTTTCATGGGGTTGGAGGACTTGGCTCACGGAGATGGAAGCGTGTTAGACTTCCGTCATCTTCCTAAAATTCATAGCAGTACTGTCCAAGTCATGGACCGCGTCAAAGATGCTTTCATTCACGGAGACTCATTTGAAGGACTTCACCAAAAGTACCTTGAGGAATACGCAAGAAACTCATCGGATAAGGTGTTGGGCTACTTGAAGTTGGACAGCGAGAATAATGTGACGGCAGAGTCAATGAAAAAAACGTTAGGATGGTTCCAGTGGGGATTACGCCGCATATGGGATGATCTTGCTTACTCTTTGGACGAGGATAGCAACATAGCGGAAGATATTGTAAACTTGGTGTGCTCGTTCATTTTCCCACAATATCTGAACTTCATTGAGAGCCACACCAAAAGTTTTGGTTATGATTTGCTCAATAATTTCGATAGGGAGTATAAAGCACCATCGGACCTTATAAGTTACTCGTTACATACGTTTGCTGATCTTCATGATCACTATCATAATCCTAGTACACCCTAA 1989 0.4163 MPNFFHESKPVSSRLDQFKKWVLQRPHEWWLVTSLLSGAVGLICFAVSIFNHQLKGWNLMLKFFISLVCIAPMGIAVLFVKKWPKGNKPWFRAHLVCCAIIVTYILTFFLDKEKEEGPDVWRLVSYFAFSLTSLSLGMQTKLGFLGEVVYFFLGILLIGLIKIRWWLVFPAALFSYIIIILYSFLDELKEERYRIPTTTTSSPAAMTPSAPVLVTKTSHLEDTSSIGFCTQMCPQQSTDTDNETVPLIVPQPVPVDFELKFTGLLSWLNEKDWELVQELERPLKNYVEGSIEQVPMALIEDPNFLKDRILPQQILEGLNELMMNCGHFGEYMKNLVVDKYSKSRRMFLKRCQEELQLKVTRPSHELNKENDKERIMKWTKLSNIALRVLFPNERMICDRVFGSSSDISLKCFKQVCLELARDLVFFVDQVAANTVQYQQSDYLPHLFHMFRTQNDLIIPSFELLFSDTQFSDSLWTEEKLRRAIKDYIFMGLEDLAHGDGSVLDFRHLPKIHSSTVQVMDRVKDAFIHGDSFEGLHQKYLEEYARNSSDKVLGYLKLDSENNVTAESMKKTLGWFQWGLRRIWDDLAYSLDEDSNIAEDIVNLVCSFIFPQYLNFIESHTKSFGYDLLNNFDREYKAPSDLISYSLHTFADLHDHYHNPSTP 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211472g00009 662 SUPERFAMILY Cullin repeat-like 314 554 IPR016159 -
Stsc211472g00009 662 Gene3D Exocyst complex component Exo70 265 537 - -
Stsc211472g00009 662 Pfam Exo70 exocyst complex subunit 377 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc211472g00009 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 305 526 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211472g00009 Stsc-Chr211472 80593 82728 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211472g00009 293 499 EXO70 exocyst subunit family AT5G58430 33.484 6.63e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211472g00009 - - adu:107458223 520.005