Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211471g00039 ATGGGAGCACACTCTCATGGACCAAGCCCTACCTCTCTTGACATGGAAGCTGCCACAGATTCTCACTATCATTTACTTGCTTCAGTTTTGGGAAGCCATGAGAAAGCGAAAGAAGGGATGATATATTCATACAATAAGCACATCAATGGGTTTTCCGCGCTACTTGAAGAGGAAGAAGCAGCAGCTATTGCAAAAAAGCAGAATGTGGTGTCGGTGTTCCTGAGCAAGGAGCACAAACTTCACACAACAAGGTCATGGGAATTTCTTGGACTACGAAGAAATGCTAAGAACACAGCATGGCAAAAGGGTAGATATGGTGAAAATACAATCATCGCCAACATTGACACAGGGGTTTGGCCGGAATTGAGAAGCTTCAATGACAAAGGATATGGCTCTGTCCCCTCAAAATGGCGTGGGGGTAACGTTTGTCAAATAGACACACTCCCTGGCGCTACAAAAACTCCTTGCAACAGGAAGCTTATCGGAGCAAGATACTTCAGCAATGCTTATGAGGCCACTGTTGGCAAGCTCAACCCAAAGTTGCACACAGCACGTGATTTTGAAGGTCACGGTACCCACACTCTCTCAACCGCCGGTGGTAACTTCGTGGAAGGTGCACACGTCTTTGCCGTTGGAAACGGCACCGCAAAGGGAGGATCCCCGAGAGCTAGGGTTGCAGCTTATAAGGTTTGTTGGTCCGTGACCGACCCAACCAGTTGCCATGAAGCTGATGTACTGGCTGCAATAGACCAAGCCATAGCCGACGGCGTCGATCTAATCTCGCTCTCTGCCGGCGGCCGCCAAGCGGTCACTCCAGAAGATGTATTCACTGATGCTGTTTCCCTTGGAGCCTTCCATGCAATTGCTAACAATATCTTGTTAGTCGCTTCTGCCGGGAACGATGGCCCTACACCTGCAACTGTTGTCAATGGAGCTCCATGGATACTCACCGTTGCTGCTAGCTCCCTAGATAGAGATTTCAGCAGTACCATTACTCTTGATAATGGTCAACAAATCTCGGGAGGCAGTCTTTCCGTATCGTTGCAATCTAACCAGGCCTTTTCTTTGATCTCTTCAACCGATGCTAGACTTCCAAATGCCACAATTCGAGATGCTCGACTTTGTAAGGCAGGAACACTTGACCCTGCAAAAGTGAAAGGCAAAGTGGTGAATTGCCTGAGAGGAGGGAATATAAAATCAGTTGGTGAGGGTTTAGAAGCTTATTTTGCAGGTGCAAAGGGAATGCTGTTGGAAAATCAAAAGAAACAAGGCAAAACACTCACCGATGAGGCTCATATGTTGACTACTGTGACCTTCCCACCACCACCTGCATCTCCACCTACAGAGCGGATTCCCAACAATTATGATGTCATAACTGCCACCGCCACAGCTCCACCAAAACCGCCCACCACAGTAAGGCTCTCCCAAGCAAAAACAGTGATTGGAAGGAAGGCAGCTCCAGTTATGGCTTCCTACTCTTCTAGAGGACCCAATAAGATTCAGCCATCAGTACTCAAGCCTGATGTAACTGCTCCTGGAGTAAACATACTTGCTGCCTATTCACTCTTCGCAAGTGCCTCTGGCCTCTCAGTAGATACTCGTCGTGGCTTTGAATTCAATGTGCTGCAAGGAACTTCTATGTCTTGCCCTCACGTTTCTGGCATTGCTGGACTTGTCAAAACACGTTATCCTCATTGGAGTCCTGCCGCTATTAAATCAGCAATCATGACTACTGCAAGCACGCGGGACAATAAAAACAAGGCAATTCAAGATGCATTTGACTCTGATTTAGCAGGACCTTTTGATTACGGTTCAGGGCATGTTCAACCAAACCTTGCAATAGAGCCAGGACTGGTTTATGATCTACATGTTAACGATTACCTCAACTTCTTGTGCGCCTCTGGGTACGACCAACAAGCCATTTCAGCACTTAATTTCAACAGCACATTTGTTTGCAAAGGAAGTCACAGCCTAAATGACTTGAACTACCCTTCAATCACACTCCCAAATTTAAGCTTGAACAATGCGGTGACCGTTACTCGTACACTAACTAATGTGGGTCCACCGGGGACATACAACGTAACTGCCAGATTGAACTGTTGCAAAATTACCGTTGTGCCCAACTCTTTAAGCTTCAGAAAACTGTATGAAAAGAAGACATTTCGAGTAACTATACAAGCATCGAGTGTTATTCAGAGGTATAAATATCAATTTGGAGAGTTAGTGTGGACAGATGGAAAGCACAGAGTTAGGAGTCCCATTGTTGTCCAACGCCGCCAGTGA 2283 0.4661 MGAHSHGPSPTSLDMEAATDSHYHLLASVLGSHEKAKEGMIYSYNKHINGFSALLEEEEAAAIAKKQNVVSVFLSKEHKLHTTRSWEFLGLRRNAKNTAWQKGRYGENTIIANIDTGVWPELRSFNDKGYGSVPSKWRGGNVCQIDTLPGATKTPCNRKLIGARYFSNAYEATVGKLNPKLHTARDFEGHGTHTLSTAGGNFVEGAHVFAVGNGTAKGGSPRARVAAYKVCWSVTDPTSCHEADVLAAIDQAIADGVDLISLSAGGRQAVTPEDVFTDAVSLGAFHAIANNILLVASAGNDGPTPATVVNGAPWILTVAASSLDRDFSSTITLDNGQQISGGSLSVSLQSNQAFSLISSTDARLPNATIRDARLCKAGTLDPAKVKGKVVNCLRGGNIKSVGEGLEAYFAGAKGMLLENQKKQGKTLTDEAHMLTTVTFPPPPASPPTERIPNNYDVITATATAPPKPPTTVRLSQAKTVIGRKAAPVMASYSSRGPNKIQPSVLKPDVTAPGVNILAAYSLFASASGLSVDTRRGFEFNVLQGTSMSCPHVSGIAGLVKTRYPHWSPAAIKSAIMTTASTRDNKNKAIQDAFDSDLAGPFDYGSGHVQPNLAIEPGLVYDLHVNDYLNFLCASGYDQQAISALNFNSTFVCKGSHSLNDLNYPSITLPNLSLNNAVTVTRTLTNVGPPGTYNVTARLNCCKITVVPNSLSFRKLYEKKTFRVTIQASSVIQRYKYQFGELVWTDGKHRVRSPIVVQRRQ 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211471g00039 760 CDD PA_subtilisin_like 330 439 - -
Stsc211471g00039 760 CDD Peptidases_S8_3 78 580 IPR034197 -
Stsc211471g00039 760 PRINTS Subtilisin serine protease family (S8) signature 106 125 IPR015500 -
Stsc211471g00039 760 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Stsc211471g00039 760 PRINTS Subtilisin serine protease family (S8) signature 186 199 IPR015500 -
Stsc211471g00039 760 ProSiteProfiles Serine proteases, subtilase domain profile. 85 614 - -
Stsc211471g00039 760 Pfam Subtilase family 106 585 IPR000209 GO:0006508|GO:0008236
Stsc211471g00039 760 FunFam Subtilisin-like protease SBT5.3 1 81 - -
Stsc211471g00039 760 SUPERFAMILY Subtilisin-like 80 618 IPR036852 GO:0004252|GO:0006508
Stsc211471g00039 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 756 IPR045051 -
Stsc211471g00039 760 Pfam Fibronectin type-III domain 660 756 IPR041469 -
Stsc211471g00039 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Stsc211471g00039 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 81 IPR037045 -
Stsc211471g00039 760 Gene3D - 324 481 - -
Stsc211471g00039 760 Gene3D - 631 759 - -
Stsc211471g00039 760 Gene3D Peptidase S8/S53 domain 109 627 IPR036852 GO:0004252|GO:0006508
Stsc211471g00039 760 FunFam Subtilisin-like protease SBT1.5 108 336 - -
Stsc211471g00039 760 Pfam Peptidase inhibitor I9 15 81 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211471g00039 Stsc-Chr211471 228802 236266 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211471g00039 1 757 Subtilisin-like Serine Gene Family AT5G59810 50.197 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211471g00039 - - aip:107635251 1106.28