Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211471g00038 | ATGTGTGTGATTCTAACACTCCCTTCAACCCAAGTTTCTGGTGATAATGGAGACAGTGATGAAGCAAATGCTCTCCTCAAATGGAGATCCACCCTTGATAACCATAGTCAAACTCTCCTATCATCTTGGAACACCACTACTAGTCCATGCAAATTTGAAGGAATTCAATGTGATAATAAGTCAAACTCAGTCTCCACCATAATTCTTGCAAATTATGGACTTCAAGGTACACTCCATGGACTGAACTTTTCTTCATTTCCCAACCTTGTTAGCATAGATATTAACAACAATTCCTTCTATGGTACCATCCCTCCACAAATTTCTAACTTGTCTAGAATTACCTATTTGAACATGTCTTACAATCATTTCAATGGTTCAATTCCTAATGAAATGTGGAAGCTAAGGTCATTACATAAGCTAGATCTTTCAAACTGCATTCTCAGTGGTAACATCTCTGCTAATGTAGCAAACTTGACCAACTTGTCACACCTAGATTTTGGAGGAAATAATCTGGAAGGAGAAATTCCCCAAGAAATTGGTATGTTGAGGAATTTAGAGTATCTAGGAACATCAGGGAATCCTCTTTTAAGAGGTTCAATTCCAAAGGAAATTGGAATGTTAACAAACCTTAGGTTCCTTGATTTATCATATTGTCCTCTCTCTGGCACTATTCCTTCAGAAATTGGAAATTTGACCAATTTGAATTCTCTTTTTTTCATTCAAAACAGCCTCTTTGGTCCAATTCCATCCTCCATTTGGAACTTGACTAGCTTGACTAACCTTTTACTCTCTACCAATAATTTTTCTGGTTCAATCCCAAATTCAGTTGGGAAGTTGGTCAATCTTGAAACCCTTGATCTGTCTCAGACTCTAATGTCTGGTCCTATTCCTGATTCTATTGGAAACTTGACAAAGCTCACCACATTGTACTTGTACCATAGCAAATTCTCAGGAACAATTCCTTCTAGTATAGGAAACTTGGTCAATGTGAATGTTCTTGTCCTTGCAGAGAACAATTTTTCTGGTCCTATTCCTTCAACTTTAGGTAACTTGGTTAGGCTCACTGATCTTCAATTGGCCACAAACAAATTCAATGGTAGCCTCCCAGAGGAAATGAATAATATCATAAACTTGGGAAATTTGCAGCTATCAGAGAACAATTTTGTTGGTAGTTTGCCATCACAAATATGCTTAGGTGGTGCATTAACCAACTTCAGTGCTGATCATAACAGTTTCACTGGTCCAGTACCAAGAACCTTAAAGAATTGCTCTAGTATCCTTAGAATCAGGCTTGATTCAAACCACATTGAAGGCAACATAACAGAAGATTTTGGTGTATATCCGGATTTGGACTACATCAATCTCAGTGGCAACAAGTTTTATGGTCACATTTCTCCAAATTGGGGAAAATGTCCTAAACTTACTTATCTTATAATTGGAAGCAACAATGTCACCGGTGTTATACCGGCGGAACTTGTTGAGGCAACCAATTTAGGTATGCTTGACCTTTCGTCGAATCAGTTGGTTGGAGAAGTTCCCAAGGAACTTGGTAAGATGAAGAAACTAGTCCAAGTGGAGATTGGCAACAACCTTCTTTCAGGAAACATTCCAGCAGAAATTGGACAGCTGCAGAGCCTCGAGATCTTGAATCTTGGAGGAAACGAGTTGAACGGCGCTATACCGAAAGAAGTTGTGGATTTACAGAAGTTAAGGGAGCTGAATTTGAGCAGGAACAAGCTTGATGGAAGCATTCCTTCTGTGTTTGGCCAATCAATGGTATCTCTTGATCTCAGTGGAAATTCACTGGATGGAACAATACCAACAAGCCTTGGAGGGCTACAACACTTGCAAGTGTTGGATTTGTCACATAACAATCTTTCAGGTACTATTCCATCAAAATTCAGCCTGACATTGGAATTTGTGAACATGTCAGATAACCAGCTAGAAGGGCCACTTCCAAATAATCCTGCTTTTCTCAATGCTGATGCATTTAAGAACAACAAAGGCTTGTGTGGGAATCATATCAAGGGAATGGTTGAATGCTCTACCAATCTCAAAAAGAGCAACAAAAAAACCATCCTATTGATATTAATCATCACTTTGGTGACTCTAGCAGTAGTTCTTTGTGGGGTTGGAATTGCAGTGTGTATTCTTTGCAGAAGTAAAAGAAGATTGGGAAACCAAGGTAAAGTCCAAGCCAAAGATGCAAGAATTGAATCACAATTTTCAATATGGAGCTATGATGGGAAAATCATGTTTGAGAACATCATTGATGCTACTAAGAATTTTGATGATTACTATCTCATTGGTGTTGGAAGCCAAGGACATGTTTACAAAGCTGAATTGCCTTCAGGACAAGTTGTTGCTGTGAAGAAGCTCCATAATCTGTTAGTAACTGATGAAGAAGTTTCAAGCACAAAGGCTTTTACAAGTGAGGTTCAAGCATTGACACATATCAAGCACAGGAACATCATAAAGCTCTTTGGATTCTGTTCACATCCACAGTTCTCATTTCTTGTTTATGAGTTCTTGGAAGGTGGGAGCTTGGATCAAATACTGAGCAATGAGGCACATGCTGTTGCATTTGATTGGGAGAAGAGGTTGAATGTTGTTAAGGGCGTGGCGAATGCTTTGTCTTACATGCATCATGATTGTTCGCCTTCTATAGTTCATCGCGATATTTCGAGCAAGAATGTCCTGTTGGATTCAGAGTATGAAGCTCATGTTTCAGATTTTGGGACTGCTAAGTTCATCAAGCCTGGCTCACATAGTTGGACAACATTTGCTGGCACTTTTGGCTATGCTGCTCCAGAACTTGCCCAAACTATGGAAGTGAATGAGAAATGCGATGTATATAGTTTTGGAGTGCTAGCTTTGGAGATCATAATGGGAAAGCACCCTGGAGATCTGATTTCATCATTGATGTCAGCATCAACAGCAGCAATGGTGAATGATTTGTTACTAATTGATCTGTTGGACCAAAGGCTTGCTCATCCGAACCCCAAGAGTGCAATTGTTGAGGAGGTGATCTTGGTTGCAAGGCTGGCTTTCTCTTGCTTGAAAACAAGCCCACATTCTCGACCAACAATGGATCAAGTTTCTAAGGCCCTTGAAATAGGAAGATCAACTTTAGTGGATCAGTTTCCAAATGTTAGACTTGGACAACTACACTGA | 3174 | 0.3948 | MCVILTLPSTQVSGDNGDSDEANALLKWRSTLDNHSQTLLSSWNTTTSPCKFEGIQCDNKSNSVSTIILANYGLQGTLHGLNFSSFPNLVSIDINNNSFYGTIPPQISNLSRITYLNMSYNHFNGSIPNEMWKLRSLHKLDLSNCILSGNISANVANLTNLSHLDFGGNNLEGEIPQEIGMLRNLEYLGTSGNPLLRGSIPKEIGMLTNLRFLDLSYCPLSGTIPSEIGNLTNLNSLFFIQNSLFGPIPSSIWNLTSLTNLLLSTNNFSGSIPNSVGKLVNLETLDLSQTLMSGPIPDSIGNLTKLTTLYLYHSKFSGTIPSSIGNLVNVNVLVLAENNFSGPIPSTLGNLVRLTDLQLATNKFNGSLPEEMNNIINLGNLQLSENNFVGSLPSQICLGGALTNFSADHNSFTGPVPRTLKNCSSILRIRLDSNHIEGNITEDFGVYPDLDYINLSGNKFYGHISPNWGKCPKLTYLIIGSNNVTGVIPAELVEATNLGMLDLSSNQLVGEVPKELGKMKKLVQVEIGNNLLSGNIPAEIGQLQSLEILNLGGNELNGAIPKEVVDLQKLRELNLSRNKLDGSIPSVFGQSMVSLDLSGNSLDGTIPTSLGGLQHLQVLDLSHNNLSGTIPSKFSLTLEFVNMSDNQLEGPLPNNPAFLNADAFKNNKGLCGNHIKGMVECSTNLKKSNKKTILLILIITLVTLAVVLCGVGIAVCILCRSKRRLGNQGKVQAKDARIESQFSIWSYDGKIMFENIIDATKNFDDYYLIGVGSQGHVYKAELPSGQVVAVKKLHNLLVTDEEVSSTKAFTSEVQALTHIKHRNIIKLFGFCSHPQFSFLVYEFLEGGSLDQILSNEAHAVAFDWEKRLNVVKGVANALSYMHHDCSPSIVHRDISSKNVLLDSEYEAHVSDFGTAKFIKPGSHSWTTFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPGDLISSLMSASTAAMVNDLLLIDLLDQRLAHPNPKSAIVEEVILVARLAFSCLKTSPHSRPTMDQVSKALEIGRSTLVDQFPNVRLGQLH | 1057 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211471g00038 | 1057 | FunFam | MDIS1-interacting receptor like kinase 2 | 844 | 1043 | - | - | |
Stsc211471g00038 | 1057 | SUPERFAMILY | Protein kinase-like (PK-like) | 743 | 1038 | IPR011009 | - | |
Stsc211471g00038 | 1057 | FunFam | Nuclear pore complex protein NUP107 | 18 | 171 | - | - | |
Stsc211471g00038 | 1057 | ProSiteProfiles | Protein kinase domain profile. | 763 | 1044 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211471g00038 | 1057 | Pfam | Leucine Rich Repeat | 209 | 231 | IPR001611 | GO:0005515 | |
Stsc211471g00038 | 1057 | SUPERFAMILY | RNI-like | 69 | 372 | - | - | |
Stsc211471g00038 | 1057 | PRINTS | Leucine-rich repeat signature | 592 | 605 | - | - | |
Stsc211471g00038 | 1057 | PRINTS | Leucine-rich repeat signature | 613 | 626 | - | - | |
Stsc211471g00038 | 1057 | Gene3D | Ribonuclease Inhibitor | 18 | 175 | IPR032675 | - | |
Stsc211471g00038 | 1057 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 191 | 272 | - | - | |
Stsc211471g00038 | 1057 | Gene3D | Ribonuclease Inhibitor | 375 | 682 | IPR032675 | - | |
Stsc211471g00038 | 1057 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 727 | 843 | - | - | |
Stsc211471g00038 | 1057 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 889 | 901 | IPR008266 | GO:0004672|GO:0006468 | |
Stsc211471g00038 | 1057 | Pfam | Leucine rich repeat N-terminal domain | 19 | 58 | IPR013210 | - | |
Stsc211471g00038 | 1057 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 375 | 685 | - | - | |
Stsc211471g00038 | 1057 | FunFam | Leucine-rich receptor-like protein kinase family protein | 273 | 370 | - | - | |
Stsc211471g00038 | 1057 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 402 | 1038 | - | - | |
Stsc211471g00038 | 1057 | Pfam | Protein kinase domain | 767 | 1034 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211471g00038 | 1057 | Gene3D | Ribonuclease Inhibitor | 176 | 272 | IPR032675 | - | |
Stsc211471g00038 | 1057 | Gene3D | Ribonuclease Inhibitor | 273 | 374 | IPR032675 | - | |
Stsc211471g00038 | 1057 | Gene3D | Phosphorylase Kinase; domain 1 | 725 | 843 | - | - | |
Stsc211471g00038 | 1057 | SMART | LRR_typ_2 | 207 | 231 | IPR003591 | - | |
Stsc211471g00038 | 1057 | SMART | LRR_typ_2 | 255 | 279 | IPR003591 | - | |
Stsc211471g00038 | 1057 | SMART | LRR_typ_2 | 543 | 566 | IPR003591 | - | |
Stsc211471g00038 | 1057 | SMART | LRR_typ_2 | 613 | 636 | IPR003591 | - | |
Stsc211471g00038 | 1057 | SMART | LRR_typ_2 | 303 | 327 | IPR003591 | - | |
Stsc211471g00038 | 1057 | SMART | LRR_typ_2 | 110 | 134 | IPR003591 | - | |
Stsc211471g00038 | 1057 | SMART | LRR_typ_2 | 567 | 591 | IPR003591 | - | |
Stsc211471g00038 | 1057 | SMART | LRR_typ_2 | 158 | 182 | IPR003591 | - | |
Stsc211471g00038 | 1057 | SUPERFAMILY | RNI-like | 296 | 647 | - | - | |
Stsc211471g00038 | 1057 | Gene3D | Transferase(Phosphotransferase) domain 1 | 844 | 1047 | - | - | |
Stsc211471g00038 | 1057 | ProSiteProfiles | Leucine-rich repeat profile. | 615 | 637 | IPR001611 | GO:0005515 | |
Stsc211471g00038 | 1057 | ProSiteProfiles | Leucine-rich repeat profile. | 569 | 591 | IPR001611 | GO:0005515 | |
Stsc211471g00038 | 1057 | Pfam | Leucine rich repeat | 592 | 648 | IPR001611 | GO:0005515 | |
Stsc211471g00038 | 1057 | Pfam | Leucine rich repeat | 87 | 145 | IPR001611 | GO:0005515 | |
Stsc211471g00038 | 1057 | Pfam | Leucine rich repeat | 522 | 580 | IPR001611 | GO:0005515 | |
Stsc211471g00038 | 1057 | Pfam | Leucine rich repeat | 449 | 508 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211471g00038 | Stsc-Chr211471 | 224780 | 228230 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211471g00038 | 20 | 937 | Receptor kinase-like Gene Family | AT4G08850 | 44.196 | 0.0 | 721 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Stsc211471g00038 | Pkinase | 3.8e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211471g00038 | - | - | gmx:100815688 | 1193.33 |