Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211471g00034 ATGGAAGGAGAAGAGAGAGGTGGTGTTCATCACAATAATTATGAGCTTCATCATCAAGTTCCATTCACCAACATAACCACACCTTCTTCACAAGCCATAATCCATGAAATGAGCTTTGTTCAGTTTGAAGAAAACCATCTCCTTGGCTTCTTGTCATCACCTAATTCTTCACAATCTCAATCTTCTCAACTCTCTCAATCCTTAAATCCGGCCACCGCCGCCGCAACCGTAACCGCAACTGTCACAACTGAAAATTGGAAAAACAATAAGCAGCAGGATGGAAGCATGGATCCGAAGGCTGTGAATGATGAAAATTGCACTGGAAATTCTGGTGAAGGCAACAATATTACTTGGTGGAAGAGTAGTGCAGGGACAGAGAAGAACAAGGTGAAAATGAGAAGGAAGCTAAGAGAGCCAAGGTTTTGTTTCCAAACAAGAAGTGATGTGGATGTTCTTGATGATGGTTACAAATGGAGGAAATATGGCCAAAAAGTTGTCAAGAATAGCCTTCATCCAAGGAGTTATTACAGGTGCACACATAGCAACTGCAGGGTGAAGAAGAGGGTTGAAAGACTGTCAGAAGATTGTAGAATGGTGATAACAACATATGAAGGTAGACACAATCACTCACCTTCCGATGACTCCAATTCTTCAGACCAAGAATGCTTCACTTCTTTTTAA 681 0.4141 MEGEERGGVHHNNYELHHQVPFTNITTPSSQAIIHEMSFVQFEENHLLGFLSSPNSSQSQSSQLSQSLNPATAAATVTATVTTENWKNNKQQDGSMDPKAVNDENCTGNSGEGNNITWWKSSAGTEKNKVKMRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPSDDSNSSDQECFTSF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211471g00034 226 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211471g00034 226 SUPERFAMILY WRKY DNA-binding domain 144 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211471g00034 226 ProSiteProfiles WRKY domain profile. 147 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211471g00034 226 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211471g00034 226 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 44 214 IPR044810 GO:0003700
Stsc211471g00034 226 Gene3D WRKY domain 138 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211471g00034 226 MobiDBLite consensus disorder prediction 205 226 - -
Stsc211471g00034 226 FunFam WRKY transcription factor 57 138 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211471g00034 Stsc-Chr211471 192695 196118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211471g00034 13 226 WRKY Transcription Factor Family AT2G44745 56.818 6.77e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211471g00034 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211471g00034 - - gmx:100788263 294.278