Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211471g00031 ATGCTCCTCTCATTACACCTCCCTTCACCATCCCCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTACCACACTCCTTCCAGAACCTTCCACAACCAGCCACACTACATCAAGTTCCAAACATCTTACCGCCAAAATCTCCGTTATCTCCAACACCTTACCGTTATCCCGCCCGACGCCCTTCCTGACTCCGACACCATCCACCGCATCTTCGCCACCATCAACCTCCTCAAATCTCACTCCCTCTCCGACTCCGATATCCCCCGCATCGCCGCCGCTGCCCCCTCCCTCTTCTCCTCCTCCTCCGCCGCCTTCTCCCCCGATAACATCTCCGCCGTGTTCCACTTCCTCGCCGCCGACGTATCCGCCTCCTCCTCCGAGTCCCGCGGTCTCGTCCTCCGATGTCCTCACCTCCTCCTCTCCCCGCACCCCGACCTCTGCCTCCGCCCAACGCTCCACTTCCTCCGCGACGAGATCGGGCTAACCGGTCTGAACCGGCCGACGAACCGGAACGCGCATCTGCTGAACACGCGCGTGGAGGATCTGCGCGTGAGAGTGGAGTTCTTGAGGGAGGAGGTTGGGTTTGAGTATGAGGAGGCGGTTAGGGCGTTGGGACGGTTACCGGCGATATTCGGTTACGGTTTGGAGAGTAATTTGAGGCCGAAATTTGAGTATTTGGTTGGTGAGATGGGTAGGGATGTTGAAGAACTTAAGAAGTTTCCACAGTACTTTGGGTTTAGCTTGCATAATAGAATTGTTCCAAGGCACTTGCATTTGAAGCAAAGGGGTGTCTTTGATGTTCCATTGAATAAGATGCTTATGTGGCGTGATGATAGATTCTATTCAAAATGGAAGTGA 858 0.5431 MLLSLHLPSPSPSSSSSSSSSSYHTPSRTFHNQPHYIKFQTSYRQNLRYLQHLTVIPPDALPDSDTIHRIFATINLLKSHSLSDSDIPRIAAAAPSLFSSSSAAFSPDNISAVFHFLAADVSASSSESRGLVLRCPHLLLSPHPDLCLRPTLHFLRDEIGLTGLNRPTNRNAHLLNTRVEDLRVRVEFLREEVGFEYEEAVRALGRLPAIFGYGLESNLRPKFEYLVGEMGRDVEELKKFPQYFGFSLHNRIVPRHLHLKQRGVFDVPLNKMLMWRDDRFYSKWK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211471g00031 285 PANTHER CGI-12 PROTEIN-RELATED 182 283 IPR003690 GO:0003690|GO:0006355
Stsc211471g00031 285 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Stsc211471g00031 285 SMART mt_12 201 233 IPR003690 GO:0003690|GO:0006355
Stsc211471g00031 285 SMART mt_12 129 162 IPR003690 GO:0003690|GO:0006355
Stsc211471g00031 285 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Stsc211471g00031 285 Coils Coil 172 192 - -
Stsc211471g00031 285 Gene3D Transcription termination factor 3, mitochondrial 39 285 IPR038538 -
Stsc211471g00031 285 MobiDBLite consensus disorder prediction 1 29 - -
Stsc211471g00031 285 MobiDBLite consensus disorder prediction 7 29 - -
Stsc211471g00031 285 Pfam mTERF 110 280 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211471g00031 Stsc-Chr211471 180724 181640 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc211471g00031 mTERF 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211471g00031 K15031 - gmx:100812333 308.145