Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211470g00023 ATGGCAGATGAAACACAAAATTATTTGAAGGAGGAGGTTGCGGAAATTGCACCATTTGATCCTACTAAGAAGAAGAAGAAGAAGAAAATCACCATTTTGGATCCTGCTGATGATGATTCAGTAGACAAGTTGACTGAGAAGACAGAAAACCTGTCAGTTTCTGAGGGAGTTGAGACGGCCTTTTCTGGTTTGAAGAAGAAGAAGAAGAAGCCAGTTGAAATCAGTAACTTGATTGATGAGAGTGGAGATGCAAATGAAGATTTAGATGATCATGCTGAAGATGATGAAGGAGAAGGGATTTCTTTGCATCCTCGTTATCCTTGGGATGGGACTGATCGTGATTATGAGTATGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTAAGAGAGAATAATCCAGAACTTGCTGGAGATCGACGGAGGACAGTTATGAGGCCACCTCAAGTCCTTCGTGAGGGTACAAAGAAAACTGTGTTCGTGAATTTTATGGATCTATGCAGAACTGGATCCCTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGGTTTGCACCAAAGAACTTCGAAGGAATTCTGCGACGCTATATCAATGACTATGTCATTTGCCTTGGATGCAAGAGTCCAGACACTATACTTTCAAAGGAAAACCGACTGTTCTTTCTCCGTTGTGAGAAGTGTGGATCTGGAAGATCAGTTGCTCCTATCAAGGCTGGTTTTGTTGCCCGTGTTGGTCGTAGGAGCACAGGAACATGA 753 0.429 MADETQNYLKEEVAEIAPFDPTKKKKKKKITILDPADDDSVDKLTEKTENLSVSEGVETAFSGLKKKKKKPVEISNLIDESGDANEDLDDHAEDDEGEGISLHPRYPWDGTDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCRTGSLDGQQRLVVKGRFAPKNFEGILRRYINDYVICLGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRSTGT 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211470g00023 250 SMART eIF2Bneu4 139 229 IPR002735 GO:0003743|GO:0006413
Stsc211470g00023 250 MobiDBLite consensus disorder prediction 76 105 - -
Stsc211470g00023 250 Pfam Domain found in IF2B/IF5 168 228 IPR002735 GO:0003743|GO:0006413
Stsc211470g00023 250 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 202 IPR016189 GO:0003743|GO:0006413
Stsc211470g00023 250 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 199 234 IPR016190 GO:0003743|GO:0006413
Stsc211470g00023 250 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 118 168 IPR045196 GO:0003743|GO:0006413
Stsc211470g00023 250 MobiDBLite consensus disorder prediction 80 95 - -
Stsc211470g00023 250 MobiDBLite consensus disorder prediction 20 41 - -
Stsc211470g00023 250 Gene3D - 112 167 - -
Stsc211470g00023 250 Gene3D - 168 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211470g00023 Stsc-Chr211470 182290 185640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211470g00023 1 248 Eukaryotic Initiation Factors Gene Family AT5G20920 70.632 9.79e-122 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211470g00023 K03238 - gmx:100783618 436.417