Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211470g00015 ATGCAAGATCCACCACCAACGCCGCCACCACCACCACCTCCAAACTCCGCTTCCCACTTACCTCCTCCTGCTCCCTCCACCGCCGCAACATCCTCAGCCTCCTCACTCTTTGTTCGCTCCGCCGCCAATGGCCACCGCCGAGCTCACTCCGAGGTCAGTTTCCGCTTACCTGACGACATGATGGACCTCTCGCCGTCGGATCCGTTCACCGGCGGCTCCTCCACCGCCAGCCTCGACGAGATCGGATCGGAGGATGACCTCTTCACGACGTACATTGACGTGGACAAGCTCGGGAATGGTTCCGGCGGATCCGGAAACGGATCGGATCCGATTGGGAACGGTACGGAATCGGAGAAGGCGGTTCCGAGGCCGAGGCACAGGCACAGTAACTCTGTGGATGGTTCTACGACGTCGTTTGGGGAGATCATGGACGCTAAGAAAGCTATGCCTCCTGATAAGCTCGCTGAGCTTTGGACCATTGATCCCAAGCGTGCTAAGAGGATACTTGCGAATCGGCAATCTGCGGCTCGATCAAAAGAGAGAAAGGCTCGCTACATTCAAGAACTTGAGCGCAAAGTTCAGACTCTTCAAACTGAAGCCACAACCCTTTCTGCCCAGCTGACACTATACCAGAGGGACACAAATGGTCTGAGTACTGAAAACACAGAGCTTAAGCTCCGCCTGCAAGCCATGGAGCAACAAGCACAACTTCGTGATGCTCTTAATGAGGCACTGAAGAAGGAAGTCGAGAGGCTTAAGGTTGCAACAGGTGAAATGATGAGCCCCACTGAGTCCTTTAACCTTGGAATGCACCAGATGCCATTCACAGGAGCGAATTTCTTCCCGATCCCACCCCAATCAGGTCCTTCTGATCACCAGAACATGCAGTTACCACCATTTGCTCATGCCCCGTCTAGCATGCCAACACATCAACTACAACAACCAAATTCTCATCCACTCTCCGAAATCATGCAAAATCATATGCAGGGACTCGACATTAACAGCAAAGGACCAACTACCGTGAAGTCCGAAGGTCCATCGATCTCTGCAAGTGAGAGTAGCACTACATTCTGA 1074 0.5326 MQDPPPTPPPPPPPNSASHLPPPAPSTAATSSASSLFVRSAANGHRRAHSEVSFRLPDDMMDLSPSDPFTGGSSTASLDEIGSEDDLFTTYIDVDKLGNGSGGSGNGSDPIGNGTESEKAVPRPRHRHSNSVDGSTTSFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTNGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSPTESFNLGMHQMPFTGANFFPIPPQSGPSDHQNMQLPPFAHAPSSMPTHQLQQPNSHPLSEIMQNHMQGLDINSKGPTTVKSEGPSISASESSTTF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211470g00015 357 FunFam probable transcription factor PosF21 162 215 - -
Stsc211470g00015 357 MobiDBLite consensus disorder prediction 331 357 - -
Stsc211470g00015 357 MobiDBLite consensus disorder prediction 1 81 - -
Stsc211470g00015 357 SMART brlzneu 159 223 IPR004827 GO:0003700|GO:0006355
Stsc211470g00015 357 MobiDBLite consensus disorder prediction 22 39 - -
Stsc211470g00015 357 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 12 334 - -
Stsc211470g00015 357 SUPERFAMILY Leucine zipper domain 163 214 IPR046347 GO:0003700|GO:0006355
Stsc211470g00015 357 Coils Coil 214 258 - -
Stsc211470g00015 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 161 224 IPR004827 GO:0003700|GO:0006355
Stsc211470g00015 357 MobiDBLite consensus disorder prediction 1 21 - -
Stsc211470g00015 357 MobiDBLite consensus disorder prediction 98 138 - -
Stsc211470g00015 357 Coils Coil 179 206 - -
Stsc211470g00015 357 Pfam bZIP transcription factor 163 220 IPR004827 GO:0003700|GO:0006355
Stsc211470g00015 357 CDD bZIP_plant_RF2 164 213 IPR044759 GO:0003700|GO:0006355
Stsc211470g00015 357 Gene3D - 162 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211470g00015 Stsc-Chr211470 105758 109035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211470g00015 45 357 bZIP Transcription Factor Family AT2G40620 54.930 2.51e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc211470g00015 bZIP_1 6.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211470g00015 - - gmx:100815680 483.026