Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211470g00005 ATGAATTCTGTGAATTTGGATTGCCTCATCCCAGTGAATCATCTTTGTGAAGATCCTGAGCAGATTTCACTAGAATGTAACAATGTTAGAGTGGAACAACCATATAATGATCCTATGAATCCATCTTCTGAACCATGCCCTCTGAATTCTGTTATTGAAGAGGTGCCAGATCATAGTCACATATCAGATGATGAAATTCCTAGAACAGGCATGTGTTTTGATTCTTTGGAGGAAACTCATGATTTTTACAAGATTTATGCAGAGAAAGTGGGATTTGTTATTAAGATTAGGAATACAAATCATGTTAAGAATGCTAAGGGTGAGAAGATTCCAATTAATCAGTCAATCCATTGTAATCGAGAGGGTAATCGCATGTCACGAGCGAAGGCACCAAGAAGATCGAAGAAGATCACGGCTGCCATGTGCAATGCAAGGGTGTATGTCAAGTTTAACAAAGACAATAGTAAATAG 471 0.3779 MNSVNLDCLIPVNHLCEDPEQISLECNNVRVEQPYNDPMNPSSEPCPLNSVIEEVPDHSHISDDEIPRTGMCFDSLEETHDFYKIYAEKVGFVIKIRNTNHVKNAKGEKIPINQSIHCNREGNRMSRAKAPRRSKKITAAMCNARVYVKFNKDNSK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211470g00005 156 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 153 - -
Stsc211470g00005 156 Pfam FAR1 DNA-binding domain 81 154 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211470g00005 Stsc-Chr211470 47231 47969 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc211470g00005 FAR1 7.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211470g00005 - K17604 ahf:114925969 119.012