Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211469g00028 ATGCATCGATTTCGATCTGCCACCGATGGAGGTGGGGCAGCATTTGATGGGAGCTCAAGGTATGGAAGAGAAGATGAAGCAGAGGCTGACTCATCTGTGTTTGTCAAATATAATAGAATGCTGCATGGAAAGAAGACTGAAAGGGGTCGCAAACGTGATACACTCACAATAAAGTTTCTTAAAAAGTACATCCATTATGCCAAGCATAGGATTCAACCTGAACTGAGTGATGAGGCTTCTGACCAAATTGCGACAGCATATGCTGAGCTCAGAAGTGCCAACTCAAATGCAAAGACTGGGGGAACACTTCCTATAACGGCCAGAACTTTAGAAACCATAATACGTCTCTCAACGGCTCATGCCAAATTGAAGTTGAGCAGAAAGGTTGAAAAGTCTGATGTTGATGCTGCTCTGAAGGTTCTTAATTTTGCAATATATCACAAAGAATTAACAGAAATGGAGGAGCGTGAGCTAGAGAGGGAAAAAGAACTTGAGAGAAAGCGTAAGGCGGAACATGATGCTGGTGGAAATGATGGTGCTGATGATGGTCCAAGAACTCGAAGGTCAACGTCAGATGCCATGGAAGTAGATGATGATACTCCAGCTCCTCAATCTGCTGCCAGTCTCACTCCTGAAAGAATCGAAGCATTTAATTCTCTGTTTGGTCAGCACATGCGTGGCAACCGCCTGGATGTTATATCCATTGCAGATATAGAGTCTGTTATCAAAGGAGCTGATTCCAGTTATAGCTCCCAAGATATATTGGACCTACTAAAGAAATTGGAAGATGACAATAGAGTGATGATAGCTGATGGAAGGGTGCATATGATATCATAA 837 0.4289 MHRFRSATDGGGAAFDGSSRYGREDEAEADSSVFVKYNRMLHGKKTERGRKRDTLTIKFLKKYIHYAKHRIQPELSDEASDQIATAYAELRSANSNAKTGGTLPITARTLETIIRLSTAHAKLKLSRKVEKSDVDAALKVLNFAIYHKELTEMEERELEREKELERKRKAEHDAGGNDGADDGPRTRRSTSDAMEVDDDTPAPQSAASLTPERIEAFNSLFGQHMRGNRLDVISIADIESVIKGADSSYSSQDILDLLKKLEDDNRVMIADGRVHMIS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211469g00028 278 Coils Coil 147 173 - -
Stsc211469g00028 278 MobiDBLite consensus disorder prediction 154 195 - -
Stsc211469g00028 278 MobiDBLite consensus disorder prediction 154 211 - -
Stsc211469g00028 278 Pfam MCM AAA-lid domain 59 142 IPR041562 -
Stsc211469g00028 278 MobiDBLite consensus disorder prediction 1 22 - -
Stsc211469g00028 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 155 IPR027417 -
Stsc211469g00028 278 Gene3D - 20 166 IPR027417 -
Stsc211469g00028 278 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 45 194 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211469g00028 Stsc-Chr211469 173673 175248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211469g00028 1 79 Core DNA Replication Machinery Family AT5G46280 63.750 5.77e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211469g00028 K02541 - jre:108990186 374.4