Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211468g00024 ATGGAAGTCTCGAACGGAATTGAAGTAGAAGCCGTTCTCCACTTCCTCAGAAAGAACGGTCTCTCTCAAGCTGAATCCGCACTCAAACAAGATATCATCGAAAAGAATGGAGATGATCCTGCCGATTCTTCTCTTCATCATCATGCTCAACCTCAAAACCTTCTTCGATCCTTCGATTACGAGAAGTTCTTCTTTCCAATGGTTCCTCCTCCGCCGCCTCTCAAGCTCCGATCCTTTTCTCGCCTGCCGGAGGATCGTGCTACCGCCGCCGCCGCCGGAACTTGCTCTGTTTCCTCCGACGACGATGACTTTGTTACTATAGCTTCATCTACTTCTCGTGCTCCTTCTTCAGAATTCATCAATCCATATGGAATTAGTTCCTTGTCTCAAACTCAAAATGATTCTGAATCCTCATCTGATAGAATGTCTCAGTTTGGCACAGCGCGTGACTATCATGATTTCGACATGCAAAATGAACCATATTGGTATAATGAAAAGGATGAAGACTATTTCATGACTCCGAATTTCGAAGGGCCTGATTTCTTTGAGAACCAAAGTGAGGATAAGTTTGTCATGACAGCAGAAATGGAAAACCAACATGACAATCATCTTAGTCTTGCTTTCGACCACAAAGAATTTCGGTTAGAGGGAAATGAATCAAATGATAGTTACATGGACAAGGTATGCCTTTATAATCATTCCTCTGTAAGGGATGAAAATCTAACTCATTCAAAAGGCTATAGTCAAGTGGATGATAACAAAGAGTTTGAAGCCGAATCGGAAGGTAAGACCGAGAAACAAATCGTATCCTATGGTTGTGAGGTTCCATTTTGCAAAGGTTGTGATGGTTCAGGNNNNNNNNNNAGTTTGAAGGAGATTCATCTTAATGATTTTCATTTGAAGGTTGTTGGAGATATTAGCTATTTTGATTCAGCTCTTGAGCATGGTGAGAATGGAAGTTTCAACTACTATGCTAAAAAGGAAAGAAGTGAAGGCTACAAGGATCCGTTTGACATAACTATCAAAGTTGCTGAAACATTTCTACCAAATGGAGGTGACAACTATGAAGCCCGAGACGGTGGAGATTTCAAGGAAGAGTTCCAAGATCCAGACATTGCTGCAGATGGAGAGGTTGCTACTGATGATGAGCTCTTAAAGTACACTCAAGAGGATGAATATGAAGTATTTGACCTGAGAATTATACACAGAAAGAACAGGACTGGATTTGAGGAAAACAAGGAATTCCCAATTGTGCTGAATACTGTCATAGCCGGCAGGTACTATGTAACGGAGTATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTCCAGGCTCACGATCTTCATACGGGAATAGACGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCATGATCCAGCCGATCAACGCCACATATTGCGTCTTTACGATTACTTTTACCATCAGGAACATTTATTCATTGTAACCGAGCTTCTTCGAGCAAACTTATATGAATTTCAAAAATTCAACCAAGAATCTGGAGGAGAAGTATATTTTACATTGAGCAGGCTACAGCTCATTACTCGTCAGATTTTGGAGGCTTTGCACTACTTGCATAACTTGGGAATCATTCACTGTGACCTGAAGCCAGAAAATATTCTAATCAAAAGTTACAAAAGATGCGAGATTAAGGTTATTGATCTCGGAAGCAGTTGCTTTCAATCCGACAATCTATGCCTATATGTACAATCCCGATCCTACAGAGCTCCTGAAGTTATGTTAGGCCTTCAATATGACGAAAAAATCGACATATGGTCTCTCGGATGCATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAACGATGGAGTTGTAATGATTCTGGCGCGCATGATTGGAATGATTGGNNNNNNNNNNAGAGATGTTGCTTAA 1968 0.4055 MEVSNGIEVEAVLHFLRKNGLSQAESALKQDIIEKNGDDPADSSLHHHAQPQNLLRSFDYEKFFFPMVPPPPPLKLRSFSRLPEDRATAAAAGTCSVSSDDDDFVTIASSTSRAPSSEFINPYGISSLSQTQNDSESSSDRMSQFGTARDYHDFDMQNEPYWYNEKDEDYFMTPNFEGPDFFENQSEDKFVMTAEMENQHDNHLSLAFDHKEFRLEGNESNDSYMDKVCLYNHSSVRDENLTHSKGYSQVDDNKEFEAESEGKTEKQIVSYGCEVPFCKGCDGSGXXXSLKEIHLNDFHLKVVGDISYFDSALEHGENGSFNYYAKKERSEGYKDPFDITIKVAETFLPNGGDNYEARDGGDFKEEFQDPDIAADGEVATDDELLKYTQEDEYEVFDLRIIHRKNRTGFEENKEFPIVLNTVIAGRYYVTEYLGSAAFSRVVQAHDLHTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADQRHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEVYFTLSRLQLITRQILEALHYLHNLGIIHCDLKPENILIKSYKRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDGVVMILARMIGMIGXXXRDVA 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211468g00024 655 PANTHER DUAL SPECIFICITY PROTEIN KINASE 133 649 - -
Stsc211468g00024 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Stsc211468g00024 655 Gene3D Transferase(Phosphotransferase) domain 1 481 652 - -
Stsc211468g00024 655 FunFam Putative serine/threonine-protein kinase dyrk2 421 508 - -
Stsc211468g00024 655 ProSiteProfiles Protein kinase domain profile. 427 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211468g00024 655 CDD PKc_DYRK_like 427 648 - -
Stsc211468g00024 655 SMART serkin_6 427 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211468g00024 655 MobiDBLite consensus disorder prediction 119 145 - -
Stsc211468g00024 655 MobiDBLite consensus disorder prediction 119 148 - -
Stsc211468g00024 655 Pfam Protein kinase domain 429 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211468g00024 655 SUPERFAMILY Protein kinase-like (PK-like) 415 640 IPR011009 -
Stsc211468g00024 655 Gene3D Phosphorylase Kinase; domain 1 422 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211468g00024 Stsc-Chr211468 195068 200175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211468g00024 424 648 MAP Kinase Gene Family AT5G19010 34.979 4.35e-31 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Stsc211468g00024 Pkinase 8.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211468g00024 - - adu:107457629 1112.44