Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc211468g00021 | ATGAAGATTCCGGCCGCCGCCACCTCCGCTGTTATCTCCGTCTTGTTCATTTTCTCCATAATAATACCTTCTTTATCCGCCCTTGGCTCAGGAACCACCCTCGCCGTAACCGACGCCTCCTCCGCCACCGTCTGCGGCGTTGTTGCGGCGTCACAGACCCGCCGAATCCAGTGCTACCGCCGGGGAAGCGGCGGAGCAATTGTCCCCGTCTACCCCGACGTTTCATTCTCTTCAATCTCCGGCGGTCGGAGCTACTTCTGCGGCCTCCGTTCCGGCAACTACAGCCTCCTCTGCTGGGACACCACCGCCACCAACGCCACCACGTTCGAAAGCAAGCGACTTTACAACAATGACACTGTTCTATTCGAGAATCTCGCCGTCGGGGACTCCCAGGTTTGCGCCACCGTTGTCGGAACCGGAACGGCGTCGTGTTGGAGAGCGGGTAGAAGCAAAGGTTCGTACTTTTCATCTGGGTCGGATCGGTTCGAGTCCATATCATCCGGGTCTGGTTTTTCATGCGGTATTATGAAGGAAAGTTTTCGAATTCGATGTTGGGGAAGTAACGTTTCGGTTGCAGATTCCATAGAGAGAGAGTTTCGAAACGTTTCGATGTTGAGCATTGTGGCTGGCGGTTCACACTTGTGTGGTTTGAATTCAACTGGGTTTTTGGTTTGTAAAGGAAGTAACAGTTTTGGGCAAATTGAGGTTCCTCATCAAGGTGTTGCTTTTGAGTATTCTGGTTTGGCTCTCGGTGATTATCACACTTGTGCTATTAGAAGATCCAATGGTTCTGTTTTCTGTTGGGGTGGCAATGGAGATTATTTCAATGCTAATTTCACAAAAGGTGTGTCTTTTGAAGTTATTGTTTCTGTTTCTGATTTTGTCTGTGGATTGACGACAAGAAATTTCTCTGTTTTGTGTTGGGGTCCTGGTTGGTCTAATAATGGTTCTGCTTCTGATTTTGAGGTTCCTTTTTTGTCTCCGATTCTTCCGGGTCCTTGTGTTCAATCTTCTTGCAGTGAGTGTGGTATCTATCCTCAATCTCAATTCTTGTGTTCTGGTTTTGGTAACATTTGTAGGCCTAAGCCTTGTGGGCCTCAAGTGCCGGTGATCCCGGCGAGGCCTCCCGCGGTGGTGCCATTGCCATTGCCTCCCCCGCCGTCTTCTCGGTCGAAGACCTTGACAACGGGGTTGTTGGCATTTGCCATAGTTGGATCAGTGGGTGCTATTGCTGGAATTTGCACTGTGCTTTATTGTTTCTGGAATGGTGTTTGTTTTGGGAAGAAGAAAATTCATAATTCTGTTCAACCAACAATAACTAGAGGTGGCAGTTCCAATAATGGTGGTGGGGCTGTTCAATCTAATAGCCCGCCGTCGATATCATTGACCATTAAGCGTCAGGGATCGAGGATAATGCGGCGGCAGAGAAGTGGAACCTCGTCGACGAAACCTCCAGACAGGGCTGAGGAGTTCACACTAGCTGAGCTTAGTGCTGCAACCAATAATTTTTCAATGGAGAACAAGATTGGCGCCGGGAGCTATGGCATTGTGTACCGAGGAAAACTCGCGGATGGCCGCGAGGTGGCGATCAAGAGAGGGGAAACAGGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCAGAATTGGCCTTCTTGTCAAGATTACACCACAAGCATTTGGTTAGGCTAGTTGGATTCTGTGAAGAGAAAGATGAGAGGCTCTTAGTTTATGAATACATGAAGAATGGAGCATTGTATGATCATTTGCATGACAAGAACAATGTGGATAAGAATAGTAGTGTCTTGAATTCTTGGAGAATGAGGATCAAAATCGCCTTGGACGCTTCGCGAGGGATAGAGTATCTCCATAATTATGCAGTTCCGTCGATAATTCACCGAGATATCAAGTCTTCCAACATTCTCATTGATGCCACTTGGACAGCAAGAGTATCCGATTTCGGATTGTCATTGATGAGTCCGGAATCCAATCTTGATTACCGGCCAACAAAGGCAGCCGGAACGGTTGGATACATCGATCCTGAGTACTACGGTCTAAATGTATTGACAGCAAAGAGTGATGTCTATGGTCTTGGAGTGGTGTTGCTAGAACTCTTAACTGGAAAGCGAGCCATATTCAAAATCGACGAAACTGGAGGCGCCCCGGTGAGCATAGTGGACTTTGCAGTGCCTGCTATCAAGACCGGGGAATTGGCAAAAATATTGGACCCGAGGGTTGCCCCGCCGGAGATGAGCGAAATGGAAGCTGTGGAGCTTGTGGCCTACACTGCCATGCATTGTGTAAATTTGGAAGGAAAGGATAGACCAACAATGGCTGACATTGTGGCCAATTTGGAGCGAGCTTTGGCCCTTTGTGAGAGCAGTAGCCATGGTAGCATTTCTAGTGGTACAATCTCAATTGTATCAGAATAA | 2442 | 0.4795 | MKIPAAATSAVISVLFIFSIIIPSLSALGSGTTLAVTDASSATVCGVVAASQTRRIQCYRRGSGGAIVPVYPDVSFSSISGGRSYFCGLRSGNYSLLCWDTTATNATTFESKRLYNNDTVLFENLAVGDSQVCATVVGTGTASCWRAGRSKGSYFSSGSDRFESISSGSGFSCGIMKESFRIRCWGSNVSVADSIEREFRNVSMLSIVAGGSHLCGLNSTGFLVCKGSNSFGQIEVPHQGVAFEYSGLALGDYHTCAIRRSNGSVFCWGGNGDYFNANFTKGVSFEVIVSVSDFVCGLTTRNFSVLCWGPGWSNNGSASDFEVPFLSPILPGPCVQSSCSECGIYPQSQFLCSGFGNICRPKPCGPQVPVIPARPPAVVPLPLPPPPSSRSKTLTTGLLAFAIVGSVGAIAGICTVLYCFWNGVCFGKKKIHNSVQPTITRGGSSNNGGGAVQSNSPPSISLTIKRQGSRIMRRQRSGTSSTKPPDRAEEFTLAELSAATNNFSMENKIGAGSYGIVYRGKLADGREVAIKRGETGTKMKKFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKNSSVLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDATWTARVSDFGLSLMSPESNLDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKIDETGGAPVSIVDFAVPAIKTGELAKILDPRVAPPEMSEMEAVELVAYTAMHCVNLEGKDRPTMADIVANLERALALCESSSHGSISSGTISIVSE | 813 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc211468g00021 | 813 | Gene3D | - | 195 | 343 | IPR009091 | - | |
Stsc211468g00021 | 813 | MobiDBLite | consensus disorder prediction | 439 | 486 | - | - | |
Stsc211468g00021 | 813 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 249 | 273 | - | - | |
Stsc211468g00021 | 813 | FunFam | serine/threonine-protein kinase-like protein CCR1 | 472 | 583 | - | - | |
Stsc211468g00021 | 813 | Gene3D | Phosphorylase Kinase; domain 1 | 465 | 583 | - | - | |
Stsc211468g00021 | 813 | PANTHER | SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 | 200 | 799 | IPR044815 | GO:0004674 | |
Stsc211468g00021 | 813 | SMART | serkin_6 | 503 | 792 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211468g00021 | 813 | Gene3D | - | 22 | 194 | IPR009091 | - | |
Stsc211468g00021 | 813 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 634 | 646 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc211468g00021 | 813 | ProSitePatterns | Protein kinases ATP-binding region signature. | 509 | 531 | IPR017441 | GO:0005524 | |
Stsc211468g00021 | 813 | Gene3D | Transferase(Phosphotransferase) domain 1 | 584 | 803 | - | - | |
Stsc211468g00021 | 813 | SUPERFAMILY | RCC1/BLIP-II | 67 | 314 | IPR009091 | - | |
Stsc211468g00021 | 813 | SUPERFAMILY | Protein kinase-like (PK-like) | 481 | 788 | IPR011009 | - | |
Stsc211468g00021 | 813 | Pfam | Protein kinase domain | 504 | 785 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211468g00021 | 813 | ProSiteProfiles | Protein kinase domain profile. | 503 | 792 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc211468g00021 | 813 | FunFam | Serine/threonine-protein kinase-like protein CCR4 | 584 | 805 | - | - | |
Stsc211468g00021 | 813 | MobiDBLite | consensus disorder prediction | 439 | 488 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc211468g00021 | Stsc-Chr211468 | 160063 | 162504 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc211468g00021 | 9 | 813 | Receptor kinase-like Gene Family | AT3G55950 | 59.179 | 0.0 | 851 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Stsc211468g00021 | Pkinase | 2.2e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc211468g00021 | - | - | gmx:100798905 | 1154.43 |