Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211468g00016 ATGGCTTCTATTCTCTTTCTCTTCTTTGCTTTTATCATAACACTCGCCGCCGCTCTCCTCCTCCGCCGGACACACCGCCACCGCAACCTCCGCCTCCCTCCGGGGACCTTAGGCCTCCCCTTCGTCGGCGAAACCTTACAGCTAATCTCCGCCTACAAGAGCGACAATCCGGAACCCTTCATAGACCGGAGAGTGAACCGGTACGGTCCGATCTTCACGACGCACGTGTTCGGCGAACCCACGGTTTTTTCGGCTGACCCGGAAACGAACCGGTTTTTTCTTCTGAACGAAGGGAAGCTCTTTGATTGCAGCTACCCCGGTTCGATATCGAATCTTCTGGGGAAACACTCGTTGCTTCTGATGAAAGGGTCGCTTCATAAGAGAATGCATTCGCTCACTGCAAGCTTCGCTAACTCCTCCATTATCAAGGATCATCTTCTTCTTGATATTGACCGACTTATTCGCCTCAACTTGGATTCTTGGTCCGACCGGGTTCTTCTCATGGAGGAGGCTAAAAAGCTTATGAGCTTTGATCCAGGTGAATGGACTGAAAATCTAAGGAAAGAGTATGTTCTTGTCATTGAAGGATTCTTCACTCTTCCTTTACCTCTCTTCTCTACCACTTACCGCAGAGCTATCAAGGCAAGAAGGAAGGTAGCGGAGGCACTAACATTGATAGTGAGGGAGAGGAGAAAAGAAAGTGAAACAGAGGAAGGAAAAAAGAATGATATGCTGGGAGCACTGTTGGGATCCAGCAACCGCTTCTCCGACGAGCAAATAGTGGATTTCATGGTGGCATTACTCGTCGCCGGCTATGAAACCACCTCCACCATAATGACTCTCGCCGTCAAGTTCCTCACGGAGACTCCTCTAGCCTTGGCACAACTCAAGGAAGAACATGATGAAATTCGGTCAAAGAAGTGTAACTCGGAGGCACCATTGGAGTGGTCAGATTATAAGTCCATGGCATTTACTCAATGTGTTGTGAACGAGACTTTGCGGGTGGGGAACATAATTGGTGGGATATTTAGGAGAGCAATGACAGACATCAACATTAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTTCGTGCTGTGCATCTAAACCCAGATCATTTCGAAGATGCTCGCACCTTCAATCCATGGAGATGGCAGAGTAACACGGAATTTACATGCCCTACAAATGTATATACTCCGTTCGGTGGAGGGCCACGGCGGTGCCCTGGCTACGAGCTCGCGAGAGTGCTTCTATCCGTCTTCCTTCATCGCATGGTAACCCAATACAGTTGGTACCCTGCAGAGGAAGATAAGTTGGTGTTTTTCCCAACAACTAGGACACAGAAGAGGTACCCTATTATAGTGAAGCGTAGAGAAGATTACAAGAAACAATGTAAAGCACAATGA 1416 0.4809 MASILFLFFAFIITLAAALLLRRTHRHRNLRLPPGTLGLPFVGETLQLISAYKSDNPEPFIDRRVNRYGPIFTTHVFGEPTVFSADPETNRFFLLNEGKLFDCSYPGSISNLLGKHSLLLMKGSLHKRMHSLTASFANSSIIKDHLLLDIDRLIRLNLDSWSDRVLLMEEAKKLMSFDPGEWTENLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARRKVAEALTLIVRERRKESETEEGKKNDMLGALLGSSNRFSDEQIVDFMVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDEIRSKKCNSEAPLEWSDYKSMAFTQCVVNETLRVGNIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNPDHFEDARTFNPWRWQSNTEFTCPTNVYTPFGGGPRRCPGYELARVLLSVFLHRMVTQYSWYPAEEDKLVFFPTTRTQKRYPIIVKRREDYKKQCKAQ 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211468g00016 471 PANTHER CYTOCHROME P450 26 29 435 - -
Stsc211468g00016 471 PRINTS E-class P450 group I signature 326 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS E-class P450 group I signature 401 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS E-class P450 group I signature 366 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS E-class P450 group I signature 411 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS P450 superfamily signature 327 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS P450 superfamily signature 270 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS P450 superfamily signature 402 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 SUPERFAMILY Cytochrome P450 25 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 404 413 IPR017972 GO:0005506|GO:0016705
Stsc211468g00016 471 Gene3D Cytochrome P450 21 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211468g00016 471 CDD CYP90-like 64 460 - -
Stsc211468g00016 471 FunFam Cytochrome P450 90A1 22 461 - -
Stsc211468g00016 471 Pfam Cytochrome P450 200 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211468g00016 Stsc-Chr211468 115581 119856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211468g00016 121 462 Cytochrome P450 AT5G05690 78.917 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211468g00016 K09588 - gmx:100781291 781.171