Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211466g00038 ATGATGAACATGCCTCACACAGAACAAGAACAACAAGAACATGAAGACTTCTTTGATGCCCTTCTCTGTGAAGAAGAGCACAACATTTTCGATGATGGTGATGACAACCACCACCAAACCCTTCTCATGGACTGTGAACACGACCACATCCTCTCTCTCATTTCCAAAGAGACACGCATTCACACCATCACTTCTTTTCTCGAAGCTCCTCGAAACGACGCCGTTTCCTGGATTTCCAGAGTTAGCTCCTTCTATGGCTTCACTCCTTTGACCACTGTACTTGCAGTCAACTACTTCGACAGGTTCCTCACAACCCTAACCTTTCAGAGTGACGACAAGCCATGGATGATTCAGCTCACTGCTGTTGCGTGCTTATCTCTTGCTGCAAAAATGGAAGAGATCCATGTCCCACTTCTCTTGGACCTCCAAGTGGAGGAACCTGAGTTCTTGTTTGAAGCCAAGACTGTTCAGAGAATGGAGCTTCTTGTGTTGTCTACACTCCAATGGAGGATGAACCCTGTCACCCCAATTTCATTCTTTGAACACATTGTTAGAAGGATTGGTTTGAAGAGCCCTTTGCATTGGGAGTTCTTATGGAGGTGCCAGCGTGTTCTTCTTTGTGTCATTCACAATTCAAGGTTTATGAGTTATCTCCCTTCTACATTGGCTGCTGCTACCATGATCCATGTTATTAAAGAGATTGAACCTTTTGATGCTATGGAATACATAAATCAACTCATGGGGTTACTCAAGATTAGTCAGGAACAAGTGAATGAGTGCTACAAACACATAGTAAAACAATTGGTGTTGCATCATGAAGGCATTTACAATCTTTGCCAGAAACGCAAAAGGGTATGTGAACCAAGTAGCCCTGGTGGTGTCATTGATGCATCTTTCAGCTGTGACAGCTCAAATGATTCGTGGACGGCAGCATCTTCGATCTCACCTTCGCTATCACTTGAGCCAATGTTCAAGAGGAGCAGAGCTCCAGACCAGCTGATGCGATTCGCTTCAGTAAATCGCGTGTCCATCGATGTTATAGATAGTCCTCCTTAA 1056 0.4441 MMNMPHTEQEQQEHEDFFDALLCEEEHNIFDDGDDNHHQTLLMDCEHDHILSLISKETRIHTITSFLEAPRNDAVSWISRVSSFYGFTPLTTVLAVNYFDRFLTTLTFQSDDKPWMIQLTAVACLSLAAKMEEIHVPLLLDLQVEEPEFLFEAKTVQRMELLVLSTLQWRMNPVTPISFFEHIVRRIGLKSPLHWEFLWRCQRVLLCVIHNSRFMSYLPSTLAAATMIHVIKEIEPFDAMEYINQLMGLLKISQEQVNECYKHIVKQLVLHHEGIYNLCQKRKRVCEPSSPGGVIDASFSCDSSNDSWTAASSISPSLSLEPMFKRSRAPDQLMRFASVNRVSIDVIDSPP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211466g00038 351 FunFam CYCLIN D32 173 262 - -
Stsc211466g00038 351 FunFam D6-type cyclin 55 172 - -
Stsc211466g00038 351 SMART Cyclin_C_2 174 291 IPR004367 -
Stsc211466g00038 351 Pfam Cyclin, C-terminal domain 174 269 IPR004367 -
Stsc211466g00038 351 PANTHER CYCLINS 14 269 IPR039361 -
Stsc211466g00038 351 CDD CYCLIN_AtCycD-like_rpt2 174 262 - -
Stsc211466g00038 351 CDD CYCLIN_AtCycD-like_rpt1 71 169 - -
Stsc211466g00038 351 Gene3D - 173 264 - -
Stsc211466g00038 351 SUPERFAMILY Cyclin-like 156 276 IPR036915 -
Stsc211466g00038 351 SMART cyclin_7 76 165 IPR013763 -
Stsc211466g00038 351 Pfam Cyclin, N-terminal domain 69 172 IPR006671 -
Stsc211466g00038 351 SUPERFAMILY Cyclin-like 38 172 IPR036915 -
Stsc211466g00038 351 Gene3D - 68 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211466g00038 Stsc-Chr211466 237084 238872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211466g00038 46 341 Core Cell Cycle Gene Families AT5G67260 53.268 1.38e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211466g00038 K14505 - gmx:100785030 430.639