Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211466g00031 ATGTATGCCTTCCTTCATCTCTCACTCCTCTCTATATTCTTTTTTCTCATTTTCAAGAAGCTCATCAAATCAAATGCATTCAAAAACCTTCCTCCAGGTCCACCATATATTCCCTATATTGGAAACCTCCACCAACTCAAACAACCATTCCACCGAACCTTCTATCACCTCTCACAAAAATATGGCAAAGTCTTCTCCCTACGGTTCGGTTCCCGCCTCGTGGTTGTCGTTTCATCACAAACGGCAGCGCAAGAATGTTTCTCCAAAAACGACATCGTTGTCGCAAACCGTCCTCACTTTCTCACCGGAAAGTACGTCGCCTACAACAACACCACCCTCTTGCTTTCCCCTTACGGAGACCACTGGCGCAACCTCCGCCGCATCGCAACGCTCGAGGTTCTCTCAACGCACCGCGTCACCTCGTTCTTGGAAATCCGAAGAGACGAGATCATGAGGCTCGTGCGCAAGCTGGCTCAGGAATGTACTAACGGCTTTAACAAAGTGGAGCTCAGTTCTAAGTTCTCGGAAATGACGTTCAACACTATAATGAGAATGGTTTCTGGAAAAAGATACTACGGCGAAGATTGTGACGTCAGCGATGTTGAAAAAGCGAGGGTATTCAGAGAAACAATCAAGGAGCTGATGGCTATGGGGGGAGCAAACAACCCTGGAGATTTCATATCAGTTCTTCGGTGGTTTGATTTGGATGGTTTGGATAGCAAGCTAAAGAGGATTAGTAAAATAACTGATTCTTTTTTACAAGAGCTTGTTGATGAACATCGCAGTGGCAAGGGAAACAATAGTGACACCATGATTGATCATCTTTTGACTCAGCAACACTCGAATCCTGAGTACTATACAGATGGAATCATCAAAGGACTTATTTTGGTTATGCTATTGGGCGGAACAGACACATCATCTGTGACTTTAGAATGGGCAATGCTTAATTTGTTGAATCATCCAAAAATAATAGAAAGGGCAAGAAAAGAGATAGACACGCTCATTAAACATGATCGTCTCATAGATGAGCCTGATATATCAAAACTCAGTTATCTTCAAAATATAGTGTACGAGACACTGCGATTACACCCTGCAGCACCATTATCGGTTCCGCATCTTTCTTCAGAGGATTTTACATTAGAAGGATATAAGGTGCCTCAAAACACAATTGTATTGGTGAATGCATGGGCTATTCATAGAGATCCCGATGTGTGGAGTGAGGATTCTACACAATTTAAACCCGAGAGGTTTGAAAAGGAAGGTGAAGCAAACAAGCTACTAGCATTTGGAATAGGAAGACGGGCTTGTCCAGGTGCGAATTTGGCACAACGCACGGTCAATTTAACGTTGGGTTTGTTGATTCAGTGTTTTGAATGGGAACGAACAACACATGAAAAAATTGGTATTGTTGAAGGAAAAGGACTTACCGTGTCCAAAAAAATACCCTTGGAGGCAATGTGTAAAGTGCGCACTCCATAA 1479 0.4307 MYAFLHLSLLSIFFFLIFKKLIKSNAFKNLPPGPPYIPYIGNLHQLKQPFHRTFYHLSQKYGKVFSLRFGSRLVVVVSSQTAAQECFSKNDIVVANRPHFLTGKYVAYNNTTLLLSPYGDHWRNLRRIATLEVLSTHRVTSFLEIRRDEIMRLVRKLAQECTNGFNKVELSSKFSEMTFNTIMRMVSGKRYYGEDCDVSDVEKARVFRETIKELMAMGGANNPGDFISVLRWFDLDGLDSKLKRISKITDSFLQELVDEHRSGKGNNSDTMIDHLLTQQHSNPEYYTDGIIKGLILVMLLGGTDTSSVTLEWAMLNLLNHPKIIERARKEIDTLIKHDRLIDEPDISKLSYLQNIVYETLRLHPAAPLSVPHLSSEDFTLEGYKVPQNTIVLVNAWAIHRDPDVWSEDSTQFKPERFEKEGEANKLLAFGIGRRACPGANLAQRTVNLTLGLLIQCFEWERTTHEKIGIVEGKGLTVSKKIPLEAMCKVRTP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211466g00031 492 CDD CYP81 62 483 - -
Stsc211466g00031 492 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 Gene3D Cytochrome P450 24 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 Pfam Cytochrome P450 31 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PANTHER CYTOCHROME P450 82C3-RELATED 12 491 - -
Stsc211466g00031 492 FunFam Cytochrome P450 family protein 22 492 - -
Stsc211466g00031 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Stsc211466g00031 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00031 492 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211466g00031 Stsc-Chr211466 186624 188605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211466g00031 4 491 Cytochrome P450 AT4G37330 54.582 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211466g00031 K13260 - gmx:100811727 723.005