Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211466g00029 ATGTCCACTTTCCTTTATCTCTCGCTCATCTCTATCTCATTCCTGCTCACTTTGAAGCTCTTGTTCAAATCAAGAGCATTCAAAAAACTTCCTCCAGGTCCACCATATCTTCCACTAATTGGAAACCTCCACCAACTCAAGCAACCATTCCACCGAACCTTCTATCAACTCTCACAAAAATATGGCAAAGTCTTCTCCCTATGGTTCGGTTCCCGCCTTGTGGTTGTCGTTTCGTCACAAACGGCAGCGCAAGAATGCTTCTCCAAAAACGACATCATTCTGGCAAATCGTCCTCACTTTCTCACCGGAACCTACATCGGTTACAACAACACCACCCTGGTTCTTTCCCCTTACGGAGACCACTGGCGCAACCTCCGCCGCATCGCAACGCTCGAGGTTCTCTCAAATCACCGCATCACCTCGTTCTTGGAAATCCGAAGAGACGAGATCATGAGGCTCGTGCAGAAGCTGGCTCAGGAATGTTCCAACGGATTCAAACGAGTGGAGCTCAGATCTAGGTTCTCGGAAATGACGTTCAACACTATAATGAGAATGGTTTCTGGAAAAAGATACTACGGTGACGATAGTGACGTCACAGATGTTGAAGAAGCAAGGAAGTTCAGAGAATTAATCAAGGAGTTGGTGGCTTTGGGGGGAGCAAACAACCCTGGAGATTTCATATCAGTTCTTCGGTGGTTCGATTTTGATGGTTTGGAGAGCAAGTTAAAGAGTATTAGTAAGAGAACTGATTCTTTTTTGCAAGGGCTTATTGATGAACATCGCAGTGGCAAGCAGAGAAACACAAACACCATGATTGATCATCTTTTAACTCAGCAACAGTTGCATCCTGAGTACTATACAGATCAAATAATCAAAGGACTTATTCTGGTTATGCTACTTGCCGGAACAGATACATCATCAGTTACTTTAGAATGGACAATGTCTAATTTATTAAACCATCCAGAGATAATAAAAAGGGCAAGAAAAGAAATAGATACACAAATTGGAGGAGATCGACTTATAGACGAGCCTGACATATCAAAACTAAATTATATTCAAAACATAGTGTACGAGACATTTCGATTGCACCCTGCAGCACCATTATTGGTTCCGCATCTTTCTTCAGAAGATTGCACCTTAGAAGGATATAAGGTGCCGCAAAACACAATTGTGTTGGTAAATGCTTGGGCTATTCATAGAGATCCCAAGGTATGGGGTGACGACTCTATAGAATTTAAGCCTGAGAGATTTGAAAAGGAAGGTGAAGTAAACAAGCTACTAACATTTGGAATAGGGAGAAGGGCTTGTCCAGGAGCGAATTTGGCACAACGCACAGTGAATTTAGCGTTAGGCTTGTTGATTCAGTGTTTTGAATGGGAACGAACAACACATGAAGAAATTGGAATGGATGAAGGAAAAGGACTCACGGTTTCAAGGAAAATTCCCTTAAAAGCGATGTGTAAAGTGCGTGATACATTTACAACTAAGACTATTATTTAA 1500 0.4213 MSTFLYLSLISISFLLTLKLLFKSRAFKKLPPGPPYLPLIGNLHQLKQPFHRTFYQLSQKYGKVFSLWFGSRLVVVVSSQTAAQECFSKNDIILANRPHFLTGTYIGYNNTTLVLSPYGDHWRNLRRIATLEVLSNHRITSFLEIRRDEIMRLVQKLAQECSNGFKRVELRSRFSEMTFNTIMRMVSGKRYYGDDSDVTDVEEARKFRELIKELVALGGANNPGDFISVLRWFDFDGLESKLKSISKRTDSFLQGLIDEHRSGKQRNTNTMIDHLLTQQQLHPEYYTDQIIKGLILVMLLAGTDTSSVTLEWTMSNLLNHPEIIKRARKEIDTQIGGDRLIDEPDISKLNYIQNIVYETFRLHPAAPLLVPHLSSEDCTLEGYKVPQNTIVLVNAWAIHRDPKVWGDDSIEFKPERFEKEGEVNKLLTFGIGRRACPGANLAQRTVNLALGLLIQCFEWERTTHEEIGMDEGKGLTVSRKIPLKAMCKVRDTFTTKTII 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211466g00029 499 CDD CYP81 62 483 - -
Stsc211466g00029 499 FunFam Cytochrome P450 family protein 22 493 - -
Stsc211466g00029 499 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Stsc211466g00029 499 Pfam Cytochrome P450 31 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00029 499 PANTHER CYTOCHROME P450 82C3-RELATED 14 490 - -
Stsc211466g00029 499 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211466g00029 Stsc-Chr211466 174871 177233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211466g00029 1 490 Cytochrome P450 AT4G37330 54.564 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211466g00029 K13260 - gmx:100811727 740.339