Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211466g00028 ATGTCCACTTTCCTTTATCTCTCACTCTTCTCTATCTCCTTCCTTCTCACTTTGAAGCTCATATTCAAATCAAGAGCATTCAAAAAATTTCCTCCAGGTCCACCATATCTTCCACTAATTGGAAACCTCCACCAACTCAAACAACCATTCCACCGAACCTTCTATCGCCTCTCACAAAAATATGGCAAAGTCTTCTCCCTATGGTTCGGTTCCCGCCTTGTGGTTGTCGTTTCGTCACAAACGGCAGCCCAAGAATGCTTCTCCAAAAACGACGTCGTTCTCGCAAACCGTCCTCACTTTCTCACCGGAACCTACCTTGGTTACAACAACACCACCGTATCGCTTTCCCCTTATGGAGACCACTGGCGCAACCTCCGCCGCATCATAACGCTCGAGGTTCTCTCAAATCACCGCATCACGTCTTTCTTGGAAATCCGAAGAGACGAGATCATGAGGCTAGTGCAGAAGCTGGCTCAGGAAGGTTCCAGCGGCTTCAAACAAGTGGAGCTCAGATCCAAGTTCTCGGAAATGACGTTCAATACTATAATGAGAATGATTTCTGGAAAAAGATACTACGGTGACGATTGTTACGTCACAGATGTTGAAGAAGCAAGGAAATTCAGAGAATTAATCAAGGAATTGGTGGCTTTGGCGGGAGCAAACAACCCTGGAGATTTCATACCAGTTCTTCGGTGGTTCGATTTTGATGGTTTGGAGAGCAAGTTAAAGAGTATTAGTAAGAGAACTGATTCTTTTTTGCAAGGGCTTATTGATGAACATCGTAGTGGCAAGCACAGAAACACAAACACCATGATTGATCATCTTTTAACTCAGCAACAGTCCCATCCCGAGTACTATACAGATCAAATCATCAAAGGACTTATTCAGGTTATGCTACTCGCTGGAACAGATACTTCATCTGTTACTTTAGAATGGGCAATGTCTAATTTATTAAATCAACCAGAAATAATAAAAAGAGCAAGAAAAGAAATAGACGAACAAATTGGAGAAGATCGCCTTATAGAGGAGCCTGACATATCAAAACTAAATTATCTTCAAAATATAGTGTACGAGACATTACGATTGCACCCTGCAGCACCATTATTGGTTCCGCATCTTTCTTCAGAAGATTGCACCATAGAAAGATATAAGGTGCCGCAAAACACAATGGTGATGGTGAATGCTTGGGCTATTCATAGAGATCCCAAAGTGTGGGGTGACGACTCTATAGAATTTAAACCTGAGAGGTTTGAAAAGGAAGGTGAAGCAAACAAGCTGCTTACATTTGGAATAGGGAGAAGGGCTTGTCCAGGAGCAAATTTGGCACAACGCACAGTGAATTTAGCGTTAGGCTTGTTGATTCAGTGTTTTGAATGGGAACGAACCACTGATGAAGAAATTGATATGGATGAAGGAAAAGGACTTGCCGTTTCAAGGAAAATTCCCTTGGAAGCAATGTGTAAAGTGCGTGATACTTTTACAACTAAGATAATTATTTAA 1500 0.4193 MSTFLYLSLFSISFLLTLKLIFKSRAFKKFPPGPPYLPLIGNLHQLKQPFHRTFYRLSQKYGKVFSLWFGSRLVVVVSSQTAAQECFSKNDVVLANRPHFLTGTYLGYNNTTVSLSPYGDHWRNLRRIITLEVLSNHRITSFLEIRRDEIMRLVQKLAQEGSSGFKQVELRSKFSEMTFNTIMRMISGKRYYGDDCYVTDVEEARKFRELIKELVALAGANNPGDFIPVLRWFDFDGLESKLKSISKRTDSFLQGLIDEHRSGKHRNTNTMIDHLLTQQQSHPEYYTDQIIKGLIQVMLLAGTDTSSVTLEWAMSNLLNQPEIIKRARKEIDEQIGEDRLIEEPDISKLNYLQNIVYETLRLHPAAPLLVPHLSSEDCTIERYKVPQNTMVMVNAWAIHRDPKVWGDDSIEFKPERFEKEGEANKLLTFGIGRRACPGANLAQRTVNLALGLLIQCFEWERTTDEEIDMDEGKGLAVSRKIPLEAMCKVRDTFTTKIII 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211466g00028 499 CDD CYP81 62 483 - -
Stsc211466g00028 499 PANTHER CYTOCHROME P450 82C3-RELATED 13 490 - -
Stsc211466g00028 499 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 Pfam Cytochrome P450 31 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 FunFam Cytochrome P450 family protein 22 493 - -
Stsc211466g00028 499 SUPERFAMILY Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 Gene3D Cytochrome P450 24 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211466g00028 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211466g00028 Stsc-Chr211466 169787 171557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211466g00028 9 490 Cytochrome P450 AT4G37370 55.441 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211466g00028 K13260 - gmx:100811727 754.207