Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211466g00016 ATGTTGGAGCTATGTCGAAAACCATTGATGTGCTTCTCATGTGGCCTAGTAGGAGGCAACTATGATGATGAGCTTTTATGGGACTTAGAGTTGAAGCCACACACCACAGAGTTCTCTGCAGAGGAGGGTGGGTTATCGGAGCAAGTGATAAAGAAAGCTTTCAGTGCAACTGAGGAGGAGTTCTTGCGTATGGTGAAGCAATCATGGATTTCCCAGCCACACATTGCTTCGGTGGGATCGTGTTGTATCCTTGGCGCAATTTCAAACGATGTTCTGTATGTTGCTAACCTTGGAGACTCGAGGGCAGTTCTTGGTCGCAAAGCATCTAATAATGTGGTGGCAGAGCGTTTGTCCACCGATCATAATGTTGGAGTGGAGGAGGTGAGAAAGGAGGTTGAGGCTCTTCATCCTGATGATGATTATGTTGTGGTTAATGCTAATGGAGTTTGGAGAATCAAGGGCATTATTCAGGTCTCAAGATCAATTGGAGATGTTTATCTAAAGAAGCCAGAGTTTGACAACAACTCCATCATGTTCCAGCAATGTGTGTGCCCGGTACCTCTAAAGAGAGCCGTGATGACGGCGGAGCCATCGATATTGACTCGGAAGTTGGAGGCAGAGGATTTGTTTCTGATCTTCGCATCGGACGGACTCTGGGAGCAATTAACGGACGAAGAGGCCGTTGAAATCGTGTCTAGAAGTCCAAGAAAAGGGATAGCAAAAAGATTGGTGAGAGCTGCACTAGAAGCTAAGTGGCAATCGGAGATTAAAGATGCTTATTAG 783 0.461 MLELCRKPLMCFSCGLVGGNYDDELLWDLELKPHTTEFSAEEGGLSEQVIKKAFSATEEEFLRMVKQSWISQPHIASVGSCCILGAISNDVLYVANLGDSRAVLGRKASNNVVAERLSTDHNVGVEEVRKEVEALHPDDDYVVVNANGVWRIKGIIQVSRSIGDVYLKKPEFDNNSIMFQQCVCPVPLKRAVMTAEPSILTRKLEAEDLFLIFASDGLWEQLTDEEAVEIVSRSPRKGIAKRLVRAALEAKWQSEIKDAY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211466g00016 260 CDD PP2Cc 15 250 IPR001932 -
Stsc211466g00016 260 Pfam Protein phosphatase 2C 39 251 IPR001932 -
Stsc211466g00016 260 SMART PP2C_4 1 248 IPR001932 -
Stsc211466g00016 260 PANTHER PROTEIN PHOSPHATASE 47 253 IPR015655 GO:0004722|GO:0006470
Stsc211466g00016 260 Gene3D - 23 259 IPR036457 -
Stsc211466g00016 260 ProSiteProfiles PPM-type phosphatase domain profile. 1 260 IPR001932 -
Stsc211466g00016 260 SUPERFAMILY PP2C-like 38 250 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211466g00016 Stsc-Chr211466 83194 85784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211466g00016 64 249 PP2C-type Phosphatase Gene Family AT4G33920 69.110 1.13e-88 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211466g00016 - K01102 gmx:100802394 347.051