Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211465g00033 ATGTCTGCTCAACAGCCAGCGCTCAACGGAGCCTACTACGGCCCCGCCATCCCCCCTCCTAAAACCTACCACCGCCCTGGACGCAGCGGCGGACCCATCGGCTGCTGCTGCGGCTGCCTCTTCAGCCTCATCTGCAAGCTCATCTTCACCATCGTGTTCGTGATCGGCGTCGCCGTCTTGGTGTTCTGGCTCATCGTTCGCCCCAACGTGGTGAAGGTCCACGTCACCGACGCGTCACTGACGCAGTTCAACTACAGCGGCAACACCCTCAAGTACAATCTTGCTCTGAACTTGACCATCCGAAACCCTAACAAGAAGCTCGGCATCTACTACGACTCTATCGAAGCGAGAACGCTGTTTGAGGATGCTAGGTTTGACTCTGATCTTTTGCCTACGTTTTACCAGGGGCACAAGAACACGACTGTGCTGTCACACGTGTTCCAGGGGCAGCAGGTGGTGCCGCTTAGTTCCGACCAGGTTTCGGAGCTGAACAAGGAGAATACGAAAGGGGTTTATGATATCCGAGTGAAGTTGTATTTGAAGGTCAGATTTAAGCTCGGCAAATTCAAGACCAGGAAGGTGAAGCCAAGGGTTACTTGCGACTTGCAGGTGCCTTTGACTTCTTCTAATGGTGGATCATCTTCTTCTAATAGCTTTCAGACCACCAAGTGCGATTGGAGTCGCTGA 687 0.5342 MSAQQPALNGAYYGPAIPPPKTYHRPGRSGGPIGCCCGCLFSLICKLIFTIVFVIGVAVLVFWLIVRPNVVKVHVTDASLTQFNYSGNTLKYNLALNLTIRNPNKKLGIYYDSIEARTLFEDARFDSDLLPTFYQGHKNTTVLSHVFQGQQVVPLSSDQVSELNKENTKGVYDIRVKLYLKVRFKLGKFKTRKVKPRVTCDLQVPLTSSNGGSSSSNSFQTTKCDWSR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211465g00033 228 PANTHER OS05G0367900 PROTEIN 35 209 IPR044839 GO:0098542
Stsc211465g00033 228 MobiDBLite consensus disorder prediction 206 228 - -
Stsc211465g00033 228 Pfam Late embryogenesis abundant protein 97 200 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211465g00033 Stsc-Chr211465 237749 238435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211465g00033 65 212 SNARE and Associated Proteins AT1G32270 39.869 1.19e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211465g00033 - - gmx:100793187 317.775