Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211465g00016 ATGGGCAAGAAAATGAAGCTTCTTCCCTCTCTTCTCAAGAATACCACTTCTTCTTCTTCTTCTTGGGCTTGGCCCTCTTGTCACCAACCAAAAACCCCCTCTTTCAGAGCCACCAAACAAATCTTCAAGACTTACTTTGACGCCACCGCCACCGCCGCCACCGCCATGGAAACACTTGTTCTCGACACCTCCGACGACCACTCCTTCTTCACTGACTCCGCCAGCTTCTCAACCACTTCCGTCGACGACGACTACTCATTGCCGTCAACCAAAGACGACTCCTCTCTCGAGACCGTCATTCGCGGCTTGCGCCACCGCTCCGACCGCCTGTTCTTCGACCCCGACGACGCCAGTTCCATCGTGGAATCAAAATCAAGAACCACCGGAACGGGAACGGAAACGGAAACTCCGGCGGAAGCGGCGTCGTCGTTGGCGTTCAAGGACAGCGTGGTGTTGTCGATGGATTCACGAGATCCTTACGTAGATTTCAAGAAGTCGATGGAGGAGATGGTGGAGGCCCATGGTGTTAAAGATTGGGAAGGTCTGGAAGAGCTTCTTGGTTGGTACTTGAAGGCTAATGGGAAGACCAACCATTGTTATATTGTTGCTGCTTTCATTGATTTGTTGCTCTCTCTTTCACTTTCTTCTTCTTCTTCTAATATCATCCCTTCAACTTCAACTTCAACATCCTCATCAAATTCTGATTCTCCTTCTTCCTCTTCTTCTTCCTCCTATTCTCCTTCTTCTCCTTTGTCGTCCTTTTATAGTTCTTCACTCTCTTCCTCCTGTTGTGTTTCTTGTTTGGAGGCCCAACAACAAGAACAGATCCATCATCATGATAAGGAGCAAGATAAGGAGGAGATCAAATATGAAAATGTGAATGTCACTCCTTCTTCTTCAGAAGTCATAAAAGTTTAA 918 0.476 MGKKMKLLPSLLKNTTSSSSSWAWPSCHQPKTPSFRATKQIFKTYFDATATAATAMETLVLDTSDDHSFFTDSASFSTTSVDDDYSLPSTKDDSSLETVIRGLRHRSDRLFFDPDDASSIVESKSRTTGTGTETETPAEAASSLAFKDSVVLSMDSRDPYVDFKKSMEEMVEAHGVKDWEGLEELLGWYLKANGKTNHCYIVAAFIDLLLSLSLSSSSSNIIPSTSTSTSSSNSDSPSSSSSSSYSPSSPLSSFYSSSLSSSCCVSCLEAQQQEQIHHHDKEQDKEEIKYENVNVTPSSSEVIKV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211465g00016 305 MobiDBLite consensus disorder prediction 223 247 - -
Stsc211465g00016 305 MobiDBLite consensus disorder prediction 121 139 - -
Stsc211465g00016 305 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 70 214 IPR038933 GO:0045892
Stsc211465g00016 305 NCBIfam uncharacterized plant-specific domain TIGR01568 151 213 IPR006458 -
Stsc211465g00016 305 MobiDBLite consensus disorder prediction 121 140 - -
Stsc211465g00016 305 MobiDBLite consensus disorder prediction 275 291 - -
Stsc211465g00016 305 ProSiteProfiles OVATE domain profile. 152 211 IPR006458 -
Stsc211465g00016 305 MobiDBLite consensus disorder prediction 275 305 - -
Stsc211465g00016 305 Pfam Transcriptional repressor, ovate 156 212 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211465g00016 Stsc-Chr211465 147733 148650 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc211465g00016 Ovate 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211465g00016 - - ahf:112754577 238.424