Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211464g00045 ATGGATTTGGATTGGTTATTCTTGTTCCCAATGAATAACGGTGATTCTGCTACATCGGCAGCAATATTGTTCACTGTAATAGCGATTATGGGAGGGTTGCTGGCATATCTATATGGGCCGTATTGGAAGGTGAGGAAGGTTCCAGGCCCACCAACATGGCCTCTCATAGGACACCTTCATCTCATGGCTAAGTACGGTCCTGATTTGTTCACTCTTCTCGCCAAGAAATATGGCCCAATCTACAGATTTCATATGGGAAGACAACCACTAATAATAGTAGCAGATGCAGAGCTTTGTAGAGAGGTTGGAACCAGAAAAGCAAAAGACATTCCACACAGAAGCATACCCTCTCCTATCACAGCTGCCCCTATTCACCAAAGAGGTATATTCTTCTCCAGGGATGATCAATGGTCTACTATGAGAAGCACTGTTACTTCCTTCTTTCACACCTCATCCCTATCAACTATGATCCCCACAATGCAATCATTCATAGAACCTGCAACCCAGATTCTTGATTCCCATGCTCAAACACAACAAGAAATCAACTTCACTAACTTTGCTCTCAGATTAGCAACCGATGTTATTGGCCAAGCATCCTTTGGTGTCAACTTTGGCCTCTCTAAGCCTCATTCCACCATCAATACCACCAAAGATTGCGGCGACGAAGCAACACAATTCATAAACCAACATATCTTCAACACTACAAACCTCAAGATGGACTTGTCCGGTTCCTTATCCATCAAAATTGGTCTAATTCTCCCTATTCTTCAAGAGCCATGCAGGCAGATTCTCAAGAGGATACCTGGAACCATGGATTGGAAACTCGAGCGCGGTAATCGTGATCTAAGTGGCCGTTTAGATAGGATTGTAGAGAAGAGAATGGAAGAGAAAGGAAGAAGTTCAAAGGATTTCTTGTCAGCTGTGTTGAGTGGAAGAGAAAGAAAACAGAACTACCTGACACCAGAGTACATAAGTGCTCTTGCATATGAACAATTACTTGCAGGATCAGCTACCACAGCCTTTACCATGTCTTCCATTATATATTTGGTTGCAGAGCACCCTGATGTTGAGAAAAAGCTTCTTCAAGAGATTGATGGTTTTGGTCCAAAGGACAAGACTCCTACTCCTGAGGATCTTAAGGACAGGTTTCCTTATCTTGAACAGGTGATTAATGAGTCAATGAGATATTTTGCAACATCCCCATTAATTGCAAGGGAAACAGCAACTGATGTAGAGTTAGGAGGTTACTTACTTCCCAAGGGGACTTGGGTGTGGTTAGCCGTGGGAGCTCTATCAAAGGACCCAAAGAACTTTCCGGAGCCAGAAAAGTTCAAACCAGAGAGGTTTGATCCAAACAGTGATGAAATGAAAGGAAGGCATGCTGGTGCTTTTTTACCATTTGGAATAGGTTCCCGGATTTGCATTGGCAAACAATATGCTCAACAAGAGATAAAGCTTACAATGATTCATTTATACCGCAGATACGTGTTTCGTCACTCACCCAACATGGAAAACCCTATAGAATTCGACTATGGGCTTATTCTCAATTTCAAAAATGGTGTCAAGGTCCATGTTATAAAAAGAAATGTTGACTAG 1596 0.4236 MDLDWLFLFPMNNGDSATSAAILFTVIAIMGGLLAYLYGPYWKVRKVPGPPTWPLIGHLHLMAKYGPDLFTLLAKKYGPIYRFHMGRQPLIIVADAELCREVGTRKAKDIPHRSIPSPITAAPIHQRGIFFSRDDQWSTMRSTVTSFFHTSSLSTMIPTMQSFIEPATQILDSHAQTQQEINFTNFALRLATDVIGQASFGVNFGLSKPHSTINTTKDCGDEATQFINQHIFNTTNLKMDLSGSLSIKIGLILPILQEPCRQILKRIPGTMDWKLERGNRDLSGRLDRIVEKRMEEKGRSSKDFLSAVLSGRERKQNYLTPEYISALAYEQLLAGSATTAFTMSSIIYLVAEHPDVEKKLLQEIDGFGPKDKTPTPEDLKDRFPYLEQVINESMRYFATSPLIARETATDVELGGYLLPKGTWVWLAVGALSKDPKNFPEPEKFKPERFDPNSDEMKGRHAGAFLPFGIGSRICIGKQYAQQEIKLTMIHLYRRYVFRHSPNMENPIEFDYGLILNFKNGVKVHVIKRNVD 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211464g00045 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Stsc211464g00045 531 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PANTHER THROMBOXANE-A SYNTHASE 20 529 - -
Stsc211464g00045 531 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 SUPERFAMILY Cytochrome P450 41 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 Pfam Cytochrome P450 48 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00045 531 FunFam Cytochrome P450 3A4 34 530 - -
Stsc211464g00045 531 CDD cytochrome_P450 78 521 - -
Stsc211464g00045 531 Gene3D Cytochrome P450 37 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211464g00045 Stsc-Chr211464 261075 263872 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211464g00045 85 528 Cytochrome P450 AT2G26170 63.252 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211464g00045 K20771 - gmx:100797803 729.939