Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211464g00044 ATGGATTTGAATTGGTTGTTCTTGTTCCCAATGAACGGTGCAGCAATATTATTCACTGCGGTAGCGATCATGGGAGGGTTGGTGGCGTATCTCTATGGGCCGCATTGGAAGGTAAGGAAGGTTCCAGGCCCACCAACAAGGCCTCTCATAGGACACCTTCATCTCATGGCTAAGTACGGTCCAGATTTGTTCACTCTTCTCGCCAAGAAATACGGCCCAATCTACAGATATCATATGGGAAGACAACCATTAATAATAATAGCAGATGCAGAGCTTTGCAGAGAGGTTGGAACCAGAAAAGCAAAAGAAATTCCACACAGAAGCATACCCTCTCCTATTACAGCTGCTCCTATTCACCAAAAGGGTATATTCTTTTCCAGGGATGAACAATGGTCTACTATGAGAAGCACTGTTACTTCCTTCTTTCACACCTCATCCCTATCAACTATGATCCCAACAATGCAGTCATTCATAGAATCTGCAACCCAGATTTTTGATTCCCATGCTCAAACACAACAAGACATGGACTTCTCTAAGTTCTCTATCAAATTAGCAACTGATGTTGTTGGCCAAGCATCCTTTGGTGTCGACTTCGGCCTCTCTAAGCCTCATTCCACCATCAATACCACCAAAGATGGCTGCGACGAAGCAACACAATTCATAAACCAACATATCTTCAACACTACAAACCTCAAGATGGACTTGTCTGGTTCCTTATCCATCATAATTGGTCTAGTTCTCCCAATTCTTCAAGAGCCATGCAGGCAGATTCTCAAGAGGATACCTGGCACCATGGACTGGAAACTCGAGCGCGGTTATCGTGATCTAGGTGGCCGTTTAGATAGGATTGTTGAGAAGAGAATGGAAGAAGAGAAGGGAAGAACTTCAAAGGATTACTTGTCAGTATTGCTGAGTGGAAGAGAAAGGAAACAGAATTACCTGACACAAGAATACATAAGTGCTCTTGCATATGAACAATTACTTACAGGATCAGCTACTGTAGCATTTTCCATGTCTTCCATTATATACTTGGTTGCAGCGCACCCTCACGTTGAGAAAAAGCTTCTTGAAGAGATTGATGGTTTTGGTCCAAAGGACAAGACTCCCACTCTTGAGGATCTTAAGGACAAGTTTCCTTATCTTGAACAGGTGATTCATGAATCAATGAGATATATTCCGTCATCCCCATTGATTGCAAGGGAAACAGCAACTGATGTAGAGATAGGAGGTTACTTACTTCCCAAGGGGGCTTGGGTATGGTTATGTATCGGAGCTCTATTAATGGACCCAAAAAACTTTCCGGAGCCAGAAAAGTTCAAACCGGAGAGGTTTGACCCAAACTGTGAAGAAATGAAGCAAAGGCATCCCTCTGCTTTTTTACCATTTGGAATAGGTTCCCGGACTTGCACCGGCAAGCAATTTGCTCAACAAGAGATCAAGCTTACAATGATTCATTTATACCGCAGATATGTGTTTCGCCACTCGTCTAACATGGAATACCCCTTAGAATTCACCTATGGGCTTATTCGCAGTTTCAAGAACGGTGTCAAGGTCCGAGTTATAAAAAGGAACATTGACTAG 1581 0.4307 MDLNWLFLFPMNGAAILFTAVAIMGGLVAYLYGPHWKVRKVPGPPTRPLIGHLHLMAKYGPDLFTLLAKKYGPIYRYHMGRQPLIIIADAELCREVGTRKAKEIPHRSIPSPITAAPIHQKGIFFSRDEQWSTMRSTVTSFFHTSSLSTMIPTMQSFIESATQIFDSHAQTQQDMDFSKFSIKLATDVVGQASFGVDFGLSKPHSTINTTKDGCDEATQFINQHIFNTTNLKMDLSGSLSIIIGLVLPILQEPCRQILKRIPGTMDWKLERGYRDLGGRLDRIVEKRMEEEKGRTSKDYLSVLLSGRERKQNYLTQEYISALAYEQLLTGSATVAFSMSSIIYLVAAHPHVEKKLLEEIDGFGPKDKTPTLEDLKDKFPYLEQVIHESMRYIPSSPLIARETATDVEIGGYLLPKGAWVWLCIGALLMDPKNFPEPEKFKPERFDPNCEEMKQRHPSAFLPFGIGSRTCTGKQFAQQEIKLTMIHLYRRYVFRHSSNMEYPLEFTYGLIRSFKNGVKVRVIKRNID 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211464g00044 526 SUPERFAMILY Cytochrome P450 35 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 Gene3D Cytochrome P450 32 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 Pfam Cytochrome P450 42 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc211464g00044 526 PANTHER THROMBOXANE-A SYNTHASE 15 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211464g00044 Stsc-Chr211464 257942 260310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211464g00044 79 523 Cytochrome P450 AT2G26170 62.000 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211464g00044 K20771 - gmx:100797803 694.501