Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211464g00032 ATGGACTATGGTACCTTAGAAGATAGGTTATTCCGGAAAAATAATTCACCACCTATGTCATGGAGGCTGCGCTTCCATTTAGCTGCTGAGATTGCAACTGCACTTCTTTTCCTACACCAGGCAAAGCCAGAGCCGATTGTGCATCGCGATCTCAAACCAGCAAACATTCTCTTAGACAGGAGTTTCATCACCAAAATCGCAGACATCGGTCTAGCAAGATTAGTCCCTCAATCTGTTGTGGACAGCGTCACACAATATTACATGACCTCGGCTGCTGGAACATTCTGTTATATTGATCCTGAGTATCAGCAAACCGGAATATTGAGCCCGAAATCGGATGTATATTCCTTGGGAGTAGTACTGCTGCAAATAATCACAGCCAGGCCTGCTATGGGACTTTCTCACCATGTTAAGAGGGCAATTGCAAAGGAAAAATTTGAAGATATTCTTGACCCTGTGGTGCTTGATTGGCCAGTTGAGAAGGCCCTAGAGTTTGCCAAGTTAGCATTGGGCTGTTGTGAGCTCAGGAAGAAGGACAGGCCGAATCTCGCAACTGTTGTGTTGCCTGAGCTTAACCGGTTAAGAGAATTCGGAAGAACCTCAAACAATGCTGTTTAG 618 0.4531 MDYGTLEDRLFRKNNSPPMSWRLRFHLAAEIATALLFLHQAKPEPIVHRDLKPANILLDRSFITKIADIGLARLVPQSVVDSVTQYYMTSAAGTFCYIDPEYQQTGILSPKSDVYSLGVVLLQIITARPAMGLSHHVKRAIAKEKFEDILDPVVLDWPVEKALEFAKLALGCCELRKKDRPNLATVVLPELNRLREFGRTSNNAV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211464g00032 205 Pfam Protein kinase domain 22 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211464g00032 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Stsc211464g00032 205 Gene3D Transferase(Phosphotransferase) domain 1 1 203 - -
Stsc211464g00032 205 SUPERFAMILY Protein kinase-like (PK-like) 1 187 IPR011009 -
Stsc211464g00032 205 PANTHER OS02G0152300 PROTEIN 1 199 - -
Stsc211464g00032 205 SMART serkin_6 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211464g00032 205 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211464g00032 Stsc-Chr211464 208289 209233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211464g00032 1 199 Receptor kinase-like Gene Family AT5G12000 71.859 5.94e-106 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Stsc211464g00032 Pkinase 1.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211464g00032 - - lja:Lj3g3v0420630.1 327.405