Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211464g00028 ATGGAGGAGATGTCGACTACGGTTGCAGTGCCATTAACAGTAGGTAATTCTGTGTGTGATAAGCCAACCATAGCTACCCACATGGATGTATCTAGACTTAAGCTGATGACAGATACGGGGTTGTTAAGTAATTCCGTAACAACGGTTTCTACTGAAACATTTATAGGCTCTGATGAGGATCATAACAGTGGAAATCTGGAGGATGAAGTTGGTAGTACAACAGTCACGCCATCAAAAAAGGGAAGTGAACCATTGGATGATATGATATCCCAGAATAAAAGCACTTTGGTTGGTGGTGATGAAGCTTCAGCCCTAGAAATCGAGGAGGATGATACCTTATCATTGGAAGGTGATCCAATTATTGATAGCTCCTGTTCTCTTTCAGCAGCCAGTGAGAACAGTAGTATTTGTGGAGATGAGTTCGTCAATTTGGAAGCTAATCCGGATTTAGTAACAAGAAGTTCCATAGACATAGGGAAGAGCATATGTGCTGTTGATGCTGTTGCCAGGGCTGCTGATTTAGGGGAGTCAAATTTTGAGGCAGATATTATGAGTGAACCCCTTGCTGTAGCAGTTAGCCTTGAAGAAGACGCAGTAGTTGGATCTGTCACAAAGCCTACTGCAGTTGTTCTTCATCAACTACCTCTAGAAAAAGCCGTGGCTGGAACAGGTTGTCGAAGTGTTTTTGAATTGGATTGTACACCCCTCTGGGGAGTTATATCTATGTGTGGAAAAAGACCTGAGATGGAAGATGCATATCAAACAATGCCCCGATTTATGAAGATTCCTATTGAAATGCTAATTGGTGATAGGGTAATCGATGGACTGAATAAAAGTTTGAGTCAGCAAACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAACTATTGTCGTGAGCGTATGCATTTGGCCTTGGCTGAGGAAATAGAATTAGTCAAGGAAGGTCTAATAGTTGGAAGTAGCAAGGATGATTGTCAAGACCAATGGAGAAAAGCTTTCACCAATTGCTTTTTGAAGGTTGATGCTGAAGTTGGGGGAAAAGTTAATAATGAACCTGTTGCTCCAGAGACTGTCGGATCAACTGCAGTTGTTGCTGCTATCTGTTCATCTCATATCATCATTTCAAACTGTGGCGATTCAAGAGCAGTTTTGTGCCGTGGCAAAGAGCCCATGGCTTTATCTGTTGATCATAAACCCAATCGAGACGATGAATATGCAAGAATTGAGGCAGCGGGAGGGAAGGTGATCCAGTGGAATGGTCATCGTGTATTTGGTGTCCTTGCAATGTCACGGTCTATCGGTGATAGATATTTGAAGCCATGGATCATTCCGGAGCCGGAAGTAACGTTTCTTCCCCGGACGAAAGACGACGAATGCCTCATCCTGGCCAGTGATGGCCTGTGGGATGTGATGACGAATGAAGAGGCGTGCGACCTAGCTCGGAGGCGAATACTTCTCTGGCACAAGAAAAATGGCCTGACACTGCCACCAGAAAGGGGAGAGGAAGCTGACCCGGCAGCACAAGCAGCCGCAGAGTACCTGTCGAGCCGCGCCTTACAGAAAGGAAGCAAAGATAACATCACAGTGATTGTGGTGGACTTAAAAGCTCAAAGAAAATTCAAGAACAAGACATGA 1653 0.4446 MEEMSTTVAVPLTVGNSVCDKPTIATHMDVSRLKLMTDTGLLSNSVTTVSTETFIGSDEDHNSGNLEDEVGSTTVTPSKKGSEPLDDMISQNKSTLVGGDEASALEIEEDDTLSLEGDPIIDSSCSLSAASENSSICGDEFVNLEANPDLVTRSSIDIGKSICAVDAVARAADLGESNFEADIMSEPLAVAVSLEEDAVVGSVTKPTAVVLHQLPLEKAVAGTGCRSVFELDCTPLWGVISMCGKRPEMEDAYQTMPRFMKIPIEMLIGDRVIDGLNKSLSQQTIHFFGVYDGHGGSQVANYCRERMHLALAEEIELVKEGLIVGSSKDDCQDQWRKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVAAICSSHIIISNCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRTKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGLTLPPERGEEADPAAQAAAEYLSSRALQKGSKDNITVIVVDLKAQRKFKNKT 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211464g00028 550 FunFam Protein phosphatase 2C 16 224 550 - -
Stsc211464g00028 550 Gene3D - 223 550 IPR036457 -
Stsc211464g00028 550 SUPERFAMILY PP2C-like 230 541 IPR036457 -
Stsc211464g00028 550 MobiDBLite consensus disorder prediction 55 90 - -
Stsc211464g00028 550 ProSiteProfiles PPM-type phosphatase domain profile. 236 540 IPR001932 -
Stsc211464g00028 550 CDD PP2Cc 238 540 IPR001932 -
Stsc211464g00028 550 PANTHER PROTEIN PHOSPHATASE 170 540 IPR015655 GO:0004722|GO:0006470
Stsc211464g00028 550 MobiDBLite consensus disorder prediction 67 90 - -
Stsc211464g00028 550 Pfam Protein phosphatase 2C 269 533 IPR001932 -
Stsc211464g00028 550 ProSitePatterns PPM-type phosphatase domain signature. 287 295 IPR000222 GO:0043169
Stsc211464g00028 550 SMART PP2C_4 226 538 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211464g00028 Stsc-Chr211464 177778 182133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211464g00028 1 550 PP2C-type Phosphatase Gene Family AT1G17550 49.466 1.39e-168 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211464g00028 K14497 - gmx:102662702 836.254