Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211464g00023 ATGAGCGATAAGAATCCAAAAGCAGCAGATTCACCACCTGACAGCGGCAATTCCGCCACCAACCAGTGGTTTGATGAACTCTCTGACTACTTGAAGCTCAATGATGATGATCATCAATGGCCACCAGATGATGATAGTATTCCACCACCACCACCACAGCCACCATTATTTGTTCCCAATGCCGCTGGAGATTTTGGAGCAAGCGGCAGTGGCGGCGGCACCACCCACCTTCACGGCTCTTCTGAAGAGATTAGTGGAAGTCATCAGAAGAGAGTTGCATTCAGAACGAAATCAGAGGTTGAGATACTGGACGATGGTTTCAGGTGGAGGAAGTACGGAAAGAAAATGGTTAAGAACAGCCCAAACCCAAGGAACTATTATAGGTGTACAGTGGATGGATGTCCGGTTAAGAAGAGAGTTGAGAGAGACAGGGATGATCCCACTTATGTAATTACAACCTACGAAGGCAACCATACTCACCCAGGTTCTTATTAG 495 0.4707 MSDKNPKAADSPPDSGNSATNQWFDELSDYLKLNDDDHQWPPDDDSIPPPPPQPPLFVPNAAGDFGASGSGGGTTHLHGSSEEISGSHQKRVAFRTKSEVEILDDGFRWRKYGKKMVKNSPNPRNYYRCTVDGCPVKKRVERDRDDPTYVITTYEGNHTHPGSY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211464g00023 164 SUPERFAMILY WRKY DNA-binding domain 95 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211464g00023 164 Gene3D WRKY domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc211464g00023 164 SMART WRKY_cls 103 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211464g00023 164 MobiDBLite consensus disorder prediction 11 27 - -
Stsc211464g00023 164 MobiDBLite consensus disorder prediction 29 43 - -
Stsc211464g00023 164 MobiDBLite consensus disorder prediction 1 92 - -
Stsc211464g00023 164 MobiDBLite consensus disorder prediction 44 58 - -
Stsc211464g00023 164 ProSiteProfiles WRKY domain profile. 98 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211464g00023 164 FunFam WRKY transcription factor 57 89 163 - -
Stsc211464g00023 164 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc211464g00023 164 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 46 161 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211464g00023 Stsc-Chr211464 150682 151637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211464g00023 91 160 WRKY Transcription Factor Family AT5G26170 84.286 1.29e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc211464g00023 WRKY 3.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211464g00023 - - gmx:100796836 168.703