Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211464g00020 ATGAGTTTGAGTGCAGCAACAGAGGAAGATTCCTCCTCCTCCTCATCGGAGATTCACCTTCCGGCAGAGATAGACTGGCACATGCTAGACAAGTCAAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTCTCCTTCGCCCTCTACCCCATGGTCGTCCTCAAAACTCGCCAGCAAGTCTCTTCTTCACAGTACTCCTGCTTCAACATCTCCTCCGCCATTATCCGCTACGAAGGTCTCCGAGGCTTCTACAAAGGCTTCGGAACTTCTCTCATGGGAACCATCCCTGCTCGCGCTCTCTACATGGCCGCACTCGAAGTCACCAAAAGCAATGTCGGCACCGGACTCATCCAATTGGGTTTCTCCGACACCACCGCCACCGCAGCCTCTAACGCCGCCGCAGGTGTCACTTCCGCCATGGCAGCTCAGCTCGTGTGGACCCCAATCGATGTCGTAAGCCAGAGACTCATGGTTCAAGGTTGCAGCAGCAGCAGCCATAGCCATAGCAGCATGCTTAGAAATCTTAACTCTGAGAATTACAGAAATGGCATCGATGCTTTCAGGAAGATTCTGTGTGCTGATGGAGCCAGAGGATTCTACAGAGGATTCGGTATTTCGATTCTAACCTACGCGCCTTCCAATGCAGTTTGGTGGACTTCATATTCGATGGTTCACAGAGTGATTTGGAGTGCATTTGGTAGCAAGAACAGTTCCAATGATTCAAGGGCCATGGTTGGAGTTCAAGGTTTGAGTGCGGTTGTGGCGAGTGGGGTGTCTGCGATTGTGACAATGCCGCTTGACACAATCAAGACCAGGTTGCAGGTTTTGGATGCGGAGGAGAATGGAAGGAGGAGCCCGTTGACTTTTGGTCAAACTGTGAGGAACTTGGTTAAGGAAGGTGGGTTCTTAGCTTGTTACAGAGGGTTGGGTCCGAGGTGGGCTTCAATGTCTATGTCTGCTACAACCATGATCACTACCTACGAGTTCTTGAAACGATTGTCTGCTAAGTCTCAAGACCAATTTACTTGA 1032 0.5097 MSLSAATEEDSSSSSSEIHLPAEIDWHMLDKSKFFFLGAALFSGVSFALYPMVVLKTRQQVSSSQYSCFNISSAIIRYEGLRGFYKGFGTSLMGTIPARALYMAALEVTKSNVGTGLIQLGFSDTTATAASNAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCSSSSHSHSSMLRNLNSENYRNGIDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRVIWSAFGSKNSSNDSRAMVGVQGLSAVVASGVSAIVTMPLDTIKTRLQVLDAEENGRRSPLTFGQTVRNLVKEGGFLACYRGLGPRWASMSMSATTMITTYEFLKRLSAKSQDQFT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211464g00020 343 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 14 340 - -
Stsc211464g00020 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 127 228 IPR018108 -
Stsc211464g00020 343 PRINTS Mitochondrial carrier protein signature 87 107 IPR002067 GO:0055085
Stsc211464g00020 343 PRINTS Mitochondrial carrier protein signature 201 219 IPR002067 GO:0055085
Stsc211464g00020 343 PRINTS Mitochondrial carrier protein signature 253 275 IPR002067 GO:0055085
Stsc211464g00020 343 SUPERFAMILY Mitochondrial carrier 27 331 IPR023395 -
Stsc211464g00020 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 112 IPR018108 -
Stsc211464g00020 343 Pfam Mitochondrial carrier protein 39 112 IPR018108 -
Stsc211464g00020 343 Pfam Mitochondrial carrier protein 249 337 IPR018108 -
Stsc211464g00020 343 Pfam Mitochondrial carrier protein 128 230 IPR018108 -
Stsc211464g00020 343 Gene3D Mitochondrial carrier domain 32 342 IPR023395 -
Stsc211464g00020 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 334 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211464g00020 Stsc-Chr211464 132258 133289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211464g00020 1 339 Chloroplast and Mitochondria Gene Families AT5G26200 68.116 4.12e-164 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211464g00020 K15121 - gmx:100784202 508.064