Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211463g00036 ATGGGAGATTCTCCAAAGGATAAACACAACCCTAACCCAGATTTACTACAGAGCGACAAGTTGAGAAAGTATATACTGGAGTGCAGCGTTTTCCCACGGGAGGCAGAGGCTCTCAAAGAAATTAGGAACGCCACTGCATCCCACCCTTTGGGGTTCATGGAGATGCACCCTGATGCTGGTCAGCTAATGGGGTTAGTATTGAATTTGTTGAATGCCAAAAAGACAATTGAAATTGGAGTGTTTACTGGATATTCTCTTCTCCTCACCGCACTCAACATTCCTCACCATGGCAAGATCATAGCTATGGATCCAGACAGAGAAGCATATGAAATAGGATTACCAAGCATAAAAAAAGCTGGTGTGGAACACAAGATTGAGTTCATAGAGTCTCCAGCTTTGCCCATACTTGATAGCCTCTTGGAAGATACCAATAACGAGGTGAGTTTCGACTTCGCCTTCGTCGACGCTGATAAAGACAATTACTGGAATTACCATGAACGGCTTCTAAAACTGATTAAGATAGGAGGGATAATTATATACGATAACACGCTGTGGGGTGGAATGGTTGCATGGCCGGAAGAGGAAGTTCCGGCAATCAAAAGACCATTTAGGGAGGCTGTTCTCAGCTTCAACAAAGCTATCTCAGATGATTGCCGTATTGAAATTGCTCTTGCTTCTATAGGTGATGGCTTCACTATTTGCAGAAGGTGTCTTTAA 717 0.4351 MGDSPKDKHNPNPDLLQSDKLRKYILECSVFPREAEALKEIRNATASHPLGFMEMHPDAGQLMGLVLNLLNAKKTIEIGVFTGYSLLLTALNIPHHGKIIAMDPDREAYEIGLPSIKKAGVEHKIEFIESPALPILDSLLEDTNNEVSFDFAFVDADKDNYWNYHERLLKLIKIGGIIIYDNTLWGGMVAWPEEEVPAIKRPFREAVLSFNKAISDDCRIEIALASIGDGFTICRRCL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211463g00036 238 PANTHER O-METHYLTRANSFERASE-RELATED 11 237 - -
Stsc211463g00036 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Stsc211463g00036 238 Gene3D Vaccinia Virus protein VP39 6 237 IPR029063 -
Stsc211463g00036 238 Pfam O-methyltransferase 34 236 IPR002935 GO:0008171
Stsc211463g00036 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211463g00036 Stsc-Chr211463 269718 271528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211463g00036 15 236 Monolignol Biosynthesis Gene Families AT4G26220 64.414 2.64e-105 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211463g00036 K00588 - gmx:100780516 358.221