Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211462g00033 ATGGGGTTTGGGAATAATAAGAATATTAGTGATAATAATAGCAATAATAATAATAATGTTATTAAAGCTGGAAGTTTGGATGTGGGTAAGTCAAAGGGAAGGAAGAAGAAGGTAGAGAATGAGAAAGGGTGGTGGCCTAAATTCAGTTTCTTTGGGAGCTGCATACCTTCAAGATCAAAGGTTGTTACCTCCATTAGTGGCACTACTTCTACTACTCAAAATGCAGAAATCAAATCTGTGTCTGAAAGTTGCACGAAAGAAACGGTTGCTCCTCCGGAGTCCACTATGACAACTACAACAACAAGTAATGAAGAAAGTATCCCTTCCACTCCAAAAGTTAGTGAGGAGTTGAAGGTAGCTTCTTGTTTGAGAAAATTCACATTCAATGGACTTAAGGTGGCGACTCGGAACTTCAGACCGGAGAGTCTTCTTGGCGAGGGAGGGTTTGGTTGCGTGTTTAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTTAAACCGGGTACCGGTCTTACCGTTGCAGTCAAGACCCTAAATCACAATGGAAATCAGGGTCACAAAGAATGGCTTGCTGAACTAAACTATCTTGGTGATCTTGTCCATCCTAATCTTGTTAAATTGATTGGTTTCTGTATAGAAGATGACCAGAGATTATTGGTTTACGAGTTTATGCCTCGAGGCAGTTTGGAGAATCACCTCTTTAGAAGGCCCCTACCGCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTTCATGAAGAGGCTCAGAGGCCAATAATCTATCGCGATTTCAAGACATCTAATATCCTATTGGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTTGCCAAAGATGGTCCCGAGGGGGAAAAGACGCATGTATCAACAAGGGTCATGGGAACATATGGTTATGCTGCTCCGGAGTATGTCATGACCGGACATTTGACATCAAAAAGTGATGTCTACAGTTTTGGAGTGGTGCTTCTTGAAATGCTCACCGGCCGGCGAGCAATCGATAAGAGAAGACCAAACGGAGAACACAATCTGGTGGAGTGGGCTAGACCTGTACTTGGAGATCATAGGATGCTATTCCGGATAGTTGATCCTCGGCTCGAAGGCCACTTCTCCCTGAAAGGTGCACAGAAAGCTGCCCAGCTAGCTGCTCAATGCCTTAGCCGCGACCCGAAATCAAGACCTTTGATGAGTGAAGTTGTTCAAACTTTAAAGCCATTGCCAAACCTCAAGGACATGGCCATTTCTTCTTACCACTTCCAGGTCGCCCGGGTCGATCGTACCTTGTCCATGCCGAATCATAAAAACGGCATCAAAACGCAGTTAGTAGCTTTACCGAAGAAAGGTCAACCTGTAAGGACATTGTCAACTCCAAATGTTCCACATGGTTCTCCATATCTCAATTATAGCAAGTCTCCAAAACCAAAGGTGTAA 1476 0.4383 MGFGNNKNISDNNSNNNNNVIKAGSLDVGKSKGRKKKVENEKGWWPKFSFFGSCIPSRSKVVTSISGTTSTTQNAEIKSVSESCTKETVAPPESTMTTTTTSNEESIPSTPKVSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHNGNQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKRRPNGEHNLVEWARPVLGDHRMLFRIVDPRLEGHFSLKGAQKAAQLAAQCLSRDPKSRPLMSEVVQTLKPLPNLKDMAISSYHFQVARVDRTLSMPNHKNGIKTQLVALPKKGQPVRTLSTPNVPHGSPYLNYSKSPKPKV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211462g00033 491 PANTHER OS01G0588500 PROTEIN-RELATED 96 421 - -
Stsc211462g00033 491 MobiDBLite consensus disorder prediction 1 38 - -
Stsc211462g00033 491 Gene3D Transferase(Phosphotransferase) domain 1 224 438 - -
Stsc211462g00033 491 ProSitePatterns Protein kinases ATP-binding region signature. 144 176 IPR017441 GO:0005524
Stsc211462g00033 491 CDD STKc_IRAK 144 421 - -
Stsc211462g00033 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Stsc211462g00033 491 FunFam Serine/threonine-protein kinase BIK1 105 223 - -
Stsc211462g00033 491 MobiDBLite consensus disorder prediction 466 480 - -
Stsc211462g00033 491 MobiDBLite consensus disorder prediction 86 110 - -
Stsc211462g00033 491 MobiDBLite consensus disorder prediction 1 24 - -
Stsc211462g00033 491 FunFam Probable serine/threonine-protein kinase PBL8 224 437 - -
Stsc211462g00033 491 Pfam Protein kinase domain 141 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211462g00033 491 SUPERFAMILY Protein kinase-like (PK-like) 113 418 IPR011009 -
Stsc211462g00033 491 MobiDBLite consensus disorder prediction 463 491 - -
Stsc211462g00033 491 ProSiteProfiles Protein kinase domain profile. 138 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211462g00033 491 Gene3D Phosphorylase Kinase; domain 1 122 223 - -
Stsc211462g00033 491 MobiDBLite consensus disorder prediction 86 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211462g00033 Stsc-Chr211462 231707 235500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211462g00033 124 434 Glycoside Hydrolase AT3G07070 55.414 8.30e-115 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc211462g00033 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211462g00033 - - gmx:100499647 811.601