Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211462g00026 ATGAAAAACAGTCACAACAGCAAGGCCTGTGCTGCATGCAAATTCCAAAGGCGAAGGTGCACCAAAGACTGCATTCTCGCGCCTTATTTTCCGGCGGACAAACCGAAAACATTCACCAACGCTCACCGTTTGTTCGGCGTCTGCAACATGACGAGGATTCTTAACAAGATCAATCCGGAACAACGAGATGAGTGTATGAAATCAATTATCTTTGAATCTGATATGAGAGCCAAGTTTCCGGTGACCGGTTGTTACGGTATCCTTAATCACTATGTTGATCTTATAGCTCAGGTCGAAGAGGAGTTACGCGTGGTTCGAATGTGGATCGCTTATTTCAAGCAACAAGAGCAACAGCACCACCAACCGCATCCGCAGCAGCAGCTCCTTTTACCAGATCAGTATGAATTGTTTCAACCTTCGTCTGAATTTTATTCGTTAACCGTCTACAATGAAAGTAAAGAAGATAACTGTAACTATAGTGTTGAGGAGGTGAATTTGGATGAGAAATTCTACTCCAAACTTGAAGCATTGTCTGTGTATGGACAATTTGTGGATGCAAAACAGTCAATAGTTAGATTAGATGAAGGAACTATTGCGGATCAAATCTACGCTGGTTCTGAGTTGAGATCTATGGAAGTTTCTAGAACAGATACCAAGGGCAATGAAGTAGTAAATGATAGCAAAGAAAACAGCAATAGCAAAGAAAACAGCAATATTGACCACTACAATGAAGTATCTTTTCATGATAGACAATTTCTCGTCAAACACAACCAAAAAGAGCTTCAACAAAGGCATGCGAATAGAGCAAGAGAGTGCTTACCAATTTGGGTTGGACGTGGTATTAGCTCTCCACGGTGGCTCAACAAGTGGTATCAGAGTCGATGGTTGATCGGCTTGGTTGAAGGAGTATTTATGAGAAGCATCGAAAGTCTTCTCGACAAGGTAGCTCAAGCGGTGAGTCCCACAGTTTGTGCGGCGGTGTGA 984 0.4258 MKNSHNSKACAACKFQRRRCTKDCILAPYFPADKPKTFTNAHRLFGVCNMTRILNKINPEQRDECMKSIIFESDMRAKFPVTGCYGILNHYVDLIAQVEEELRVVRMWIAYFKQQEQQHHQPHPQQQLLLPDQYELFQPSSEFYSLTVYNESKEDNCNYSVEEVNLDEKFYSKLEALSVYGQFVDAKQSIVRLDEGTIADQIYAGSELRSMEVSRTDTKGNEVVNDSKENSNSKENSNIDHYNEVSFHDRQFLVKHNQKELQQRHANRARECLPIWVGRGISSPRWLNKWYQSRWLIGLVEGVFMRSIESLLDKVAQAVSPTVCAAV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211462g00026 327 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 129 - -
Stsc211462g00026 327 MobiDBLite consensus disorder prediction 213 239 - -
Stsc211462g00026 327 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Stsc211462g00026 327 MobiDBLite consensus disorder prediction 225 239 - -
Stsc211462g00026 327 Pfam Lateral organ boundaries (LOB) domain 9 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211462g00026 Stsc-Chr211462 177034 178612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211462g00026 8 127 AS2 family AT3G13850 48.361 5.38e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc211462g00026 LOB 3.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211462g00026 - - aip:107621446 204.142