Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211461g00041 ATGTGTAAAGTCACTGGAAAAACCAACTTGACTTACGAAGAGGCTTTGGTGTCAGAAAAAAGTGCCTCTGAGAAAGTTCAACAGTTTCCAAAAGAATTAAGGGCTTCTGCTTTAAGGATTATTCAGTACAGTATGCTCCCATTGAAGGATCTAGCTGATTTCATTGCTGGAAAATTGGAGGAACGTTTGTTTGTGGGTGCTGAACTGCATGGGAAGAAGAACAATGAATTATACCCCTGCAGAATATTAAAAGTAATCCCGAAAGGAGTTAACAAATTCTGCTATGAGGTAGCTTGGCTTGACAAAGACAAGAATATAGGTGAAAAAGCAGAAGTCAATGCAGAAGATTTGGTACTAAAGAAACCATTATTCAGCAGAAATATGTTGAAGGCTTTTATCCGGGAATCCACATATAGGAATGCGCCTTGGGTTTTACATGAAGAAGTGGCAAAAAATCATAGAATTTCAACTGACATACCTGAGGAGTTAAGAGGAAGGGTTTTCTTAAAAAATGGACTTTTAACCTGCTCCAAGAAAAGAAAAACTGAGGAATCAATGGAAGGAACTGAAAACTGTAAAAGGAAGAAGTTGGATGGGGCAGAATTTGATGGTTCTACTGAAGAACAAGAAAATGGTCAGCACAAGGTTGAGCGAATCAAATATCCAATTGATGATTTGTTAGTGAAGCCTAGTCCACGTGATCCTGTATTGGCTACTCGTCCTTCTCCATCAAGAGACTTCAATGTCCCCATGAATTGTGTAGGAAATCTCTTAATGGTTTGGGATTTTTGTGCCACTTTTGGTAAAATGTTGCACTTGTTTCCCTACTCTCTAGAAGATTTTGAAAATGCAATCTGCCACAAGGACAGCAATGTTGTACTGCTTGTGGAGTCACATGCAGCTCTTTTTCGGGTTCTTATAAAAGATGAAAGCGAATACACTGAAGCTGTGAAAAAACGAAGGACAAAGTCCAAGATTACAATGGTTAACTGGACAGAATACCTATGTGATTTTCTAGAAATGATCAATATTCCTGGATTGCAGCAATATGAAGCAACCATAAAACGGGGACATTATGGCCTTGTAGATATCAATGGCAAATTAGAAATCCTATGTGAATTGATCAATCAAGTTATTGAAACGACAATTTTCAGAGAGAAGTTGGATGAGATTCTTGAACAGCGGCATGTGCTTGGGGCGTCTAGGAGGGAAGAAGCACTGGAAGATGCTAGGAAAAGAAGAGAAGAAAAAGTGATGTCGAAAGCTGAGTTAGAGAGCAATGAAGTTGTGAATGGACATCATGTGAACAGTGAAATTGTCTCATCCAACAGTGATGATGATATACAGAATGGAGACATCAGAAAGAAAAGAAACGGAGAAATAGAATCATCTAGCGACGACAATACAATTGGAAGTTTGATCAAGCATTCAAATCCTGCATCAAAGAAGATGCCTAAGTCTAAGAAGCCAAATTCAGAGTCGAAAGAACCAACGGAAAATGGAAAAGAATTACCAAAACAATTTAAGAGTGATAAGGATGCACCAGAGAAGAATAGTAAAGAACAGAGGAAAGAATATTTTGAACGGGAGATGGAGAAACGACCTATTCGTAGAAGCCCATTAGGTAAGGACAGAAATTACAATAGGTATTGGTGGTTTCGCCGTGATGGGAGGATATTTGTTGAAAGCTCTGACTCGAAGGAGTGGGGTTACTACAGCAGCAAGGAAGAGCTTGATGCATTTATGGGTTCACTGAACTGCAAGGGTGAGCGTGAAAGGGCACTGCGAAATCAACTGGAAAAATACTATAGTAGAGTATGCTCTGAACTCCAGAAACGATCGAAGGATTTGATGCAGAGGATTGCAGCGGACGAGTCTGTCCTTCGAAGGTCCACTCGAGTTCGAGCCCCTCCCCGGCAAAACCCTGCAAATGCTTTCCTCAATTATGTTAACAAGTGGAAAGTAGATTAG 1971 0.3988 MCKVTGKTNLTYEEALVSEKSASEKVQQFPKELRASALRIIQYSMLPLKDLADFIAGKLEERLFVGAELHGKKNNELYPCRILKVIPKGVNKFCYEVAWLDKDKNIGEKAEVNAEDLVLKKPLFSRNMLKAFIRESTYRNAPWVLHEEVAKNHRISTDIPEELRGRVFLKNGLLTCSKKRKTEESMEGTENCKRKKLDGAEFDGSTEEQENGQHKVERIKYPIDDLLVKPSPRDPVLATRPSPSRDFNVPMNCVGNLLMVWDFCATFGKMLHLFPYSLEDFENAICHKDSNVVLLVESHAALFRVLIKDESEYTEAVKKRRTKSKITMVNWTEYLCDFLEMINIPGLQQYEATIKRGHYGLVDINGKLEILCELINQVIETTIFREKLDEILEQRHVLGASRREEALEDARKRREEKVMSKAELESNEVVNGHHVNSEIVSSNSDDDIQNGDIRKKRNGEIESSSDDNTIGSLIKHSNPASKKMPKSKKPNSESKEPTENGKELPKQFKSDKDAPEKNSKEQRKEYFEREMEKRPIRRSPLGKDRNYNRYWWFRRDGRIFVESSDSKEWGYYSSKEELDAFMGSLNCKGERERALRNQLEKYYSRVCSELQKRSKDLMQRIAADESVLRRSTRVRAPPRQNPANAFLNYVNKWKVD 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211461g00041 656 MobiDBLite consensus disorder prediction 414 533 - -
Stsc211461g00041 656 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 2 68 IPR013136 -
Stsc211461g00041 656 Pfam DDT domain 252 309 IPR018501 -
Stsc211461g00041 656 MobiDBLite consensus disorder prediction 486 533 - -
Stsc211461g00041 656 Coils Coil 407 427 - -
Stsc211461g00041 656 MobiDBLite consensus disorder prediction 430 447 - -
Stsc211461g00041 656 SMART testlast3 251 312 IPR018501 -
Stsc211461g00041 656 MobiDBLite consensus disorder prediction 448 463 - -
Stsc211461g00041 656 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 536 602 IPR028941 -
Stsc211461g00041 656 ProSiteProfiles WAC domain profile. 1 75 IPR013136 -
Stsc211461g00041 656 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 654 - -
Stsc211461g00041 656 ProSiteProfiles DDT domain profile. 251 312 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211461g00041 Stsc-Chr211461 210566 214909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211461g00041 517 601 Homeobox Transcription Factor Family AT1G28420 38.298 7.39e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Stsc211461g00041 WSD 6.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211461g00041 - - gmx:100789956 918.302