Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211461g00037 ATGGAGTATGCAGCTGGAGGAGAGCTCTTTGAGAGAATATGCAATGCTGGAAGGTTTAGTGAAGATGAGGCTAGATATTTCTTTCAGCAACTGATTTCTGGTGTCCATTACTGTCATGCAATGCAAATATGCCACAGGGATTTGAAGCTGGAAAATACCCTTTTAGATGGGAGCCCTGCACCTCGCCTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCTTTGCTCCATTCACGACCCAAATCAACTGTTGGAACTCCAGCTTATATCGCACCAGAGGTTCTTTCTAGGAGGGAGTATGATGGGAAGTTGGCTGATGTATGGTCATGTGGGGTGACTCTTTATGTCATGCTAGTTGGAGCATATCCCTTTGAGGATCAGGATGACCCTAGGAATTTTAGGAAAACAATTCAGCGTATAATGGCTGTTCAGTACAAAATCCCTGATTACGTTCACATCTCTCAAGATTGCAAACACCTTCTTTCTCGCATATTTGTCGCTAACCCATTGAGGAGAATTTCTCTTAAGGAAATCAAGAGCCACCCATGGTTTCTAAAGAACCTACCAAGGGAGCTAACTGAATCAGCTCAAGCTGCCTACTACCAGAGAGGCAACCCAAGCTTTTCTGTTCAAAGCGTGGATGAGATCATGAAAATCGTGGGAGAGGCAAGGGACCCTCCTCCGGTATCTAGGCCTGTCAAAGGTTTTGGCTGGGAAGGCGAAGAAGAAGAGGAAGTGGAAGAAGAGGTGGAGGAAGAGGAAGAGGAAGAAGATGAGTATGACAAGAGGGTCAAGGAGGTTCATGCAAGTGGAGAATTTCACATCAGTTAA 831 0.4477 MEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCKHLLSRIFVANPLRRISLKEIKSHPWFLKNLPRELTESAQAAYYQRGNPSFSVQSVDEIMKIVGEARDPPPVSRPVKGFGWEGEEEEEVEEEVEEEEEEEDEYDKRVKEVHASGEFHIS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211461g00037 276 Gene3D Transferase(Phosphotransferase) domain 1 1 223 - -
Stsc211461g00037 276 MobiDBLite consensus disorder prediction 240 260 - -
Stsc211461g00037 276 Coils Coil 239 270 - -
Stsc211461g00037 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Stsc211461g00037 276 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211461g00037 276 MobiDBLite consensus disorder prediction 227 276 - -
Stsc211461g00037 276 MobiDBLite consensus disorder prediction 261 276 - -
Stsc211461g00037 276 Pfam Protein kinase domain 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211461g00037 276 SUPERFAMILY Protein kinase-like (PK-like) 1 215 IPR011009 -
Stsc211461g00037 276 SMART serkin_6 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211461g00037 276 PANTHER SERINE/THREONINE KINASE 1 239 - -
Stsc211461g00037 276 FunFam Serine/threonine-protein kinase SRK2A 4 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211461g00037 Stsc-Chr211461 191970 193763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211461g00037 1 225 CBL-interacting serine-threonine protein kinases AT1G30270 40.086 2.09e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Stsc211461g00037 Pkinase 6.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211461g00037 K14498 - gmx:547968 515.383