Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211461g00036 ATGGAAAAGTACGAGGCCGTGAAGGATTTAGGAGCTGGGAATTTTGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAGCTCGTTGCCATGAAATACATAGAGCGTGGCCACAAGATTGATGAGAATGTGGCAAGAGAGATTATCAACCACAGATCCCTTCGGCACCCGAACATAATTCGCTTCAAGGAGGAAAGGAATTTACTTGTTTGA 216 0.4676 MEKYEAVKDLGAGNFGVARLMRNKETKELVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEERNLLV 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211461g00036 71 Gene3D Phosphorylase Kinase; domain 1 1 68 - -
Stsc211461g00036 71 Pfam Protein kinase domain 4 65 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211461g00036 71 ProSiteProfiles Protein kinase domain profile. 4 71 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc211461g00036 71 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Stsc211461g00036 71 PANTHER CAMK FAMILY PROTEIN KINASE 1 66 - -
Stsc211461g00036 71 SUPERFAMILY Protein kinase-like (PK-like) 2 64 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211461g00036 Stsc-Chr211461 191197 191847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211461g00036 3 65 CBL-interacting serine-threonine protein kinases AT2G26980 35.821 1.73e-09 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Stsc211461g00036 Pkinase 1.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211461g00036 K14498 - dcr:108204732 130.183