Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211461g00033 ATGGAGAGGGCACGATTTGGGCTTATCCTTTGTTTGGTTCTTCTCATTGCTTCTCAGGAGATGGTGGAGGGAAGGAGGTGTGAATCACAGAGCCATCGTTTTAAAGGGAAATGCCTGAGCGACACAAACTGCGGAAACGTTTGCCGTGGTGAGGGCTTCACAGGTGGCGATTGCCGTGGTTTCCGCAGACGCTGCTTTTGCACCAGGATTTGTTGA 216 0.5139 MERARFGLILCLVLLIASQEMVEGRRCESQSHRFKGKCLSDTNCGNVCRGEGFTGGDCRGFRRRCFCTRIC 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211461g00033 71 Gene3D - 25 71 IPR036574 -
Stsc211461g00033 71 PANTHER DEFENSIN-LIKE PROTEIN 1 6 68 - -
Stsc211461g00033 71 PRINTS Purothionin signature 26 41 IPR008176 GO:0006952
Stsc211461g00033 71 PRINTS Purothionin signature 56 70 IPR008176 GO:0006952
Stsc211461g00033 71 Pfam Gamma-thionin family 25 71 - -
Stsc211461g00033 71 SMART gth_4 26 71 IPR003614 GO:0006952
Stsc211461g00033 71 SUPERFAMILY Scorpion toxin-like 25 71 IPR036574 -
Stsc211461g00033 71 ProSitePatterns Gamma-thionins family signature. 25 48 IPR008176 GO:0006952
Stsc211461g00033 71 CDD Knot1 36 68 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211461g00033 Stsc-Chr211461 175720 176107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211461g00033 9 71 Plant Defensins Gene Families AT2G02120 65.672 3.00e-25 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211461g00033 - - pvu:PHAVU_009G158100g 69.707