Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211461g00030 ATGAGATTCTTGGGCTATGATAACCCTTCCGATGAAAACACTCTTAGTGTGCAAAAGATTATGTTAGTTCAGGGTACTGTAGGGTTGATTGCTGGTGCCCCTTCATCCTGTATTACAACCACGTTCGATACTATCAAGACAAGATTACAGGTGATGGGACATGAAAACAAAAGCTCTATAAAACAGGTTGCAAAAGATTTAATGAACGAAGATGGTCGGAAAGGCTTTTATAGAGGGTTTGATTCATGTTTCTCATGGGATAAGTTGGGATTTAAAGCAATTCATATTGAGTGCTACCTTTTCAATATGCCATATGTTGCAAACACCATTTTTATTTAA 339 0.3717 MRFLGYDNPSDENTLSVQKIMLVQGTVGLIAGAPSSCITTTFDTIKTRLQVMGHENKSSIKQVAKDLMNEDGRKGFYRGFDSCFSWDKLGFKAIHIECYLFNMPYVANTIFI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211461g00030 112 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 105 IPR018108 -
Stsc211461g00030 112 SUPERFAMILY Mitochondrial carrier 22 84 IPR023395 -
Stsc211461g00030 112 Pfam Mitochondrial carrier protein 24 80 IPR018108 -
Stsc211461g00030 112 Gene3D Mitochondrial carrier domain 2 92 IPR023395 -
Stsc211461g00030 112 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211461g00030 Stsc-Chr211461 155737 156510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211461g00030 2 84 Chloroplast and Mitochondria Gene Families AT5G15640 60.000 1.89e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211461g00030 K15121 - gmx:100781796 115.931