Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211461g00029 ATGAGCAGATTCTTGGGCTATGATAACCCTTCCGATGAAAACACTCTTAGTGTGCAAAAGATTATGTTAGTTCAGGGTACTGTAGGGTTGATTGCTGGTGCCCCTTCATCCTGTATTACAACCACGTTCGATACTATCAAGACAAGATTACAGGTGATGGGACATGAAAACAAAAGCTCTATAAAACAGGTTGCAAAAGATTTAATGAACGAAGATGGTCGGAAAGGCTTTTATAGAGGGTTTGATTCATGTTTCTCATGGGATAAGTTGGGATTTAAAGCAATTCATATTGAGTGCTACCTTTTCAATATGCCATATGTTGCAAACACCATTTTTATTTAA 342 0.3743 MSRFLGYDNPSDENTLSVQKIMLVQGTVGLIAGAPSSCITTTFDTIKTRLQVMGHENKSSIKQVAKDLMNEDGRKGFYRGFDSCFSWDKLGFKAIHIECYLFNMPYVANTIFI 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211461g00029 113 Pfam Mitochondrial carrier protein 25 81 IPR018108 -
Stsc211461g00029 113 SUPERFAMILY Mitochondrial carrier 23 85 IPR023395 -
Stsc211461g00029 113 Gene3D Mitochondrial carrier domain 1 93 IPR023395 -
Stsc211461g00029 113 ProSiteProfiles Solute carrier (Solcar) repeat profile. 20 106 IPR018108 -
Stsc211461g00029 113 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211461g00029 Stsc-Chr211461 155548 156510 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211461g00029 3 85 Chloroplast and Mitochondria Gene Families AT5G15640 60.000 1.88e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211461g00029 K15121 - gmx:100782750 115.931