Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211461g00001 ATGGAGTATGCTGCTGCTGAGGGGGCCGGGGGCCTGGAGGAGCTCTTCCATGCGTACGGGGTCAGGTACTTTACAGCGGCCAAGGTGGCGGAGTTAGGGTTCACGGCGAGGACTCTGGTGGACATGAAAGAGGAGGAGCTGGACCACATGATGAACAGCCTCTCCCAGATCTTCCGTTGGGATCTCCTCGTCGGTGAGCGTTACGGCATCAAAGCCGCCGTCCGAGCCGAGCGTAGAAGAATCCAGCAACACCACCATCAACTCCTCATGAGGCGCCTTACCCCCAACAACAACAACAACGCCCCCCTTGATGCTCTCTCTCAACAACAAGACATGAGGAAGAGGATGAGAAGCCATAACGAGGAGGAAGAGGAAGATGAAGAAGAAGAGGAAGAAGAAGAGGAGAGACAGAGAGAGCACCCCTTCATAGTGACGGAGCCTGGGGAAGTGGCACGTGGCAAGAAGAACGGCCTGGATTATCTGTTCCATCTGTACGAGCAGTGCCGTGATTTCTTGATCCAAGTGCAGAGCATTGCCAAGAACCGCGGTCAAAAATGCCCCACCAAGGTCACAAACGAGGTGTTCAGGTACGCCAAGAAAGCAGGGGCGCACTACATAAATAAGCCCAAGATGAGACACTACGTGCACTGCTACGCGCTTCACTGCCTGGACGAGGAGACGTCGAACGAGCTGAGGAGGCAGTTCAAGGAGAGAGGAGAGAACGTTGGTGCGTGGAGGCATGCCTGCTACAAGCCCCTTGTTGCAATTGCTGCTCTTCACCACCACGACATTGACTCCATTTTCAACTCTCATCCTCGTCTTTCCATCTGGTATGTTCCCACCAAGCTTCGCCAACTCTGTCACACCCACAGGAACAATACTTCTGCTTCCACTTCCACTTCCACCTCCACCTCCATCCACCACCATCATCATCGTCATCATCTCTTCTAG 951 0.5415 MEYAAAEGAGGLEELFHAYGVRYFTAAKVAELGFTARTLVDMKEEELDHMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIQQHHHQLLMRRLTPNNNNNAPLDALSQQQDMRKRMRSHNEEEEEDEEEEEEEEERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQSIAKNRGQKCPTKVTNEVFRYAKKAGAHYINKPKMRHYVHCYALHCLDEETSNELRRQFKERGENVGAWRHACYKPLVAIAALHHHDIDSIFNSHPRLSIWYVPTKLRQLCHTHRNNTSASTSTSTSTSIHHHHHRHHLF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211461g00001 316 Coils Coil 106 140 - -
Stsc211461g00001 316 PANTHER PROTEIN LEAFY 112 308 IPR002910 GO:0003677|GO:0006355
Stsc211461g00001 316 Pfam Floricaula / Leafy protein SAM domain 9 84 IPR035079 -
Stsc211461g00001 316 Gene3D Protein LEAFY 125 295 IPR038276 -
Stsc211461g00001 316 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 133 294 IPR035209 GO:0003677
Stsc211461g00001 316 MobiDBLite consensus disorder prediction 92 107 - -
Stsc211461g00001 316 MobiDBLite consensus disorder prediction 92 149 - -
Stsc211461g00001 316 MobiDBLite consensus disorder prediction 291 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211461g00001 Stsc-Chr211461 4815 5765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211461g00001 10 305 Orphan Transcription Factor Family AT5G61850 57.923 2.58e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Stsc211461g00001 C_LFY_FLO 3.3e-101 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211461g00001 - - ahf:112791011 459.529