Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc211460g00022 ATGGATCCGCCACCAACACTGCCACCGTCAATGCCACCACTTCCAACTACCATAGCTCCTACCAGTGTCATGGCTGCTGCCGCCGCTTCAATTCAAACAAACAACCCCGACTCAGTCGAATCCTCGCCGCGCTCTCGAATTGGTGAAGCATGGAATGATGACCTTATTGCACCGGTTCCCGGCGCCAAGCTCCGCCTCATGTGCAGCTATGGTGGCCACATCATGCCACGCCCCCATGATAAGTCCCTAAGTTACATAGGTGGTGACACTAGAATCGTGGTGGTGGATCGGAATTCGACTCTGAAGGACCTCTGTTTAAGGCTTTCCCGCACCTTACTGAATGGAAGACCCTTCACACTCAAGTACCAGTTACCAAATGAGGACCTTGACAACCTCATCTCAGTCGCCACGGATGAAGACCTTGACAACATGATTGAAGAGTATGATCGTGTGGCTGCAGCAACAGCATCTCCCCTGAAGCCTTCACCTTCAAGACTCAGGGTGTTCTTGTTCTTCTCCAAGCCAGAGACTACTGTTTCAATGGGATCACTCCTTGATGATGCTAAATCCGAGACATGGTTCGTTGATGCTCTCAACAACTCAGGGATCCTCACAAGGGGTGTGTCAGATTCTGCAGCAGGTGATGCCATTCTGAACCTTGATGGTGCTGGCCCTGCTGTTTCAGCTAGTGGTTCAAGCAACAACTTGGAGGCTCAAGCTGCTGCAGCAGCAGAGTCTTTGGCTCTGGCTGATAATATCACTGGAAACAATAACAACAGCAGCAGCAAGGTGAAGAATTTGCAGGATGTTGTAGCTGTGAATTCATTACCCGGCTCTCCTTCATCTGCTTCTTCTCCTTCAATGGCTAATCTCCCACCGATTCGGGTTCGAGTCGATGAGAATGGTGCTAGTAGGCTTCAGCAGGAGCAGAGGGTTGGGGTGATGGAGGAGCAGTTTGCACAGATGACAATTGGTGCAAGTGGTGTGAGGCAAGATGAAGGGTTTGTTGTTGTTCCCTCTGCTGTGGCTAGGCCTGCTGCAGTGCCTGCAGCTACTACAACAGCTTCAGCAGCAATGGTTACTAGCAATAGCAGTGATAACATGAATAGGTTTATATCTGATGATGAGAGATCAGATCCTGGGATTCCTATTGGGTTTGGGAAGCCTCCTTTACCATTGCAACTTGTGCAACCAAGGACTGCTGGTGGTCTGAGTTTACCTTCTCCAGATTCAGTTACAAGTGACACTAGTAGCATTGCATCTACAAATTCTTTCACAAAGAATGTGTACTATCAAGAACAAGTGCAACCTTCACATGTTGATAACAAAGCTCCTACTATAAGCAATGCTAAGATTGAAATCAGAGAGCAAATCCAGGATCCAAACTACACATTACCTCCACAATTGGATCAAAACCAGCAACTCCACCAGCAATTTGTACAAGCAAGCAGCCCCTACGTTCACCACCCTGCAACCGCCACCAGCACAGTGCCAATGTCATCTTACTACCCAGTTTACGCGCCACCTCCTCGGTTGCCATCACAGCCACAACTTCACCAGCATCCAATTCCTCAAACTCAGCAACAACAACAGTATCAACCAGTTTATGTTATGCCTGTTGGACACACACAACAACCATACAATGTAACATTACAACACAACATAGCTGATCCTAACATGGTAGCATCAGGTAGACCACTAGTACCCCAGAGTATTGCTGCTCCTCCTGCAGTGTCAACAACAGCATACAAAGATGGGACATTACCAATTTACCCTCCTAGGCCAAATACCCAACCAACAACCACTCAGGCATTTATTCAAATACCTTCCAGTCAGTTTCAGCAACAACCACAGTATGTGGGTTTGGCTCAGGTTCAGCACCATCAACCACCACCACCACAGCACATTGCTCTGGCTCCATCTGGTGGGAGTGGTGGTGCTACTAATTATGGTTATGAATATGGTGGTGCTGTGCAAGATCAAGCCGCATACTACACACAACAGCAACAAGCTACTACTGCTCCATTGGCTTCTCAGTACCAATCCATGACTCCGGCAGCGGCTGCGGCCGCCCTCTCGGATGCTTCGAAGCAATTCCCTAATGAGAATCTTCAGCAAAACAGAACTTCACAGCCAGTATAG 2142 0.4837 MDPPPTLPPSMPPLPTTIAPTSVMAAAAASIQTNNPDSVESSPRSRIGEAWNDDLIAPVPGAKLRLMCSYGGHIMPRPHDKSLSYIGGDTRIVVVDRNSTLKDLCLRLSRTLLNGRPFTLKYQLPNEDLDNLISVATDEDLDNMIEEYDRVAAATASPLKPSPSRLRVFLFFSKPETTVSMGSLLDDAKSETWFVDALNNSGILTRGVSDSAAGDAILNLDGAGPAVSASGSSNNLEAQAAAAAESLALADNITGNNNNSSSKVKNLQDVVAVNSLPGSPSSASSPSMANLPPIRVRVDENGASRLQQEQRVGVMEEQFAQMTIGASGVRQDEGFVVVPSAVARPAAVPAATTTASAAMVTSNSSDNMNRFISDDERSDPGIPIGFGKPPLPLQLVQPRTAGGLSLPSPDSVTSDTSSIASTNSFTKNVYYQEQVQPSHVDNKAPTISNAKIEIREQIQDPNYTLPPQLDQNQQLHQQFVQASSPYVHHPATATSTVPMSSYYPVYAPPPRLPSQPQLHQHPIPQTQQQQQYQPVYVMPVGHTQQPYNVTLQHNIADPNMVASGRPLVPQSIAAPPAVSTTAYKDGTLPIYPPRPNTQPTTTQAFIQIPSSQFQQQPQYVGLAQVQHHQPPPPQHIALAPSGGSGGATNYGYEYGGAVQDQAAYYTQQQQATTAPLASQYQSMTPAAAAAALSDASKQFPNENLQQNRTSQPV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc211460g00022 713 Gene3D - 84 172 - -
Stsc211460g00022 713 SUPERFAMILY CAD & PB1 domains 79 182 - -
Stsc211460g00022 713 PANTHER OS05G0427100 PROTEIN-RELATED 35 545 - -
Stsc211460g00022 713 MobiDBLite consensus disorder prediction 696 713 - -
Stsc211460g00022 713 MobiDBLite consensus disorder prediction 691 713 - -
Stsc211460g00022 713 CDD PB1_UP2 67 171 - -
Stsc211460g00022 713 SMART PB1_new 78 171 IPR000270 GO:0005515
Stsc211460g00022 713 Pfam PB1 domain 79 171 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc211460g00022 Stsc-Chr211460 257998 260768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc211460g00022 63 200 MAP Kinase Kinase Kinase AT5G57610 43.571 1.65e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc211460g00022 - - ahf:112751063 1035.02